Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Gm14724-201ENSMUST00000118400 537 ntBASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Mir7686-201ENSMUST00000200604 57 ntBASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim41Q5NCC3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Gm12857-201ENSMUST00000117678 592 ntBASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Gm12783-201ENSMUST00000121425 397 ntBASIC21.19■□□□□ 0.98
Trim41Q5NCC3 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Gm22442-201ENSMUST00000157256 144 ntBASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Gm23085-201ENSMUST00000157849 293 ntBASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Gm5852-201ENSMUST00000194119 1021 ntBASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Gm5542-201ENSMUST00000195485 1089 ntBASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Gm42629-201ENSMUST00000199063 1102 ntBASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Gm13384-201ENSMUST00000117166 1344 ntBASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim41Q5NCC3 Gm43570-201ENSMUST00000199951 3688 ntBASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Gm11509-201ENSMUST00000117358 325 ntBASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Gm1848-201ENSMUST00000120711 789 ntBASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Gm25998-201ENSMUST00000175397 53 ntBASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Gm7959-201ENSMUST00000221823 1078 ntBASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim41Q5NCC3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Gm12164-201ENSMUST00000121695 551 ntBASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Gm42682-201ENSMUST00000198349 1265 ntBASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Gm19324-201ENSMUST00000213229 1169 ntBASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms