Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Gm23251-201ENSMUST00000103773 110 ntBASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Gm7851-201ENSMUST00000117574 323 ntBASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Gm44124-201ENSMUST00000204159 472 ntBASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Gm8959-201ENSMUST00000213150 571 ntBASIC13.17□□□□□ -0.3
Snx27Q3UHD6 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Gm5705-201ENSMUST00000066241 711 ntBASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx27Q3UHD6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Gm13045-201ENSMUST00000119019 712 ntBASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.16□□□□□ -0.3
Snx27Q3UHD6 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.16□□□□□ -0.3
Snx27Q3UHD6 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Gm19353-201ENSMUST00000184561 445 ntBASIC13.16□□□□□ -0.3
Snx27Q3UHD6 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.16□□□□□ -0.3
Snx27Q3UHD6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.16□□□□□ -0.3
Snx27Q3UHD6 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snx27Q3UHD6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Gm12857-201ENSMUST00000117678 592 ntBASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Gm14724-201ENSMUST00000118400 537 ntBASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Gm8566-201ENSMUST00000120174 465 ntBASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Gm12176-201ENSMUST00000121420 875 ntBASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Gm5706-201ENSMUST00000181525 993 ntBASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Gm5733-201ENSMUST00000190232 939 ntBASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Gm17931-201ENSMUST00000208132 634 ntBASIC13.15□□□□□ -0.3
Snx27Q3UHD6 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snx27Q3UHD6 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms