Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Gm31256-201ENSMUST00000194705 506 ntBASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Gm11930-201ENSMUST00000117788 190 ntBASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Gm6963-201ENSMUST00000147879 379 ntBASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Gm5070-201ENSMUST00000177599 862 ntBASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Gm18893-201ENSMUST00000198416 943 ntBASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Gm10312-201ENSMUST00000078515 489 ntBASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ctdnep1Q3TP92 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Ctdnep1Q3TP92 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ctdnep1Q3TP92 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctdnep1Q3TP92 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctdnep1Q3TP92 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ctdnep1Q3TP92 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctdnep1Q3TP92 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctdnep1Q3TP92 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.02□□□□□ -0.16
Ctdnep1Q3TP92 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ctdnep1Q3TP92 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctdnep1Q3TP92 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctdnep1Q3TP92 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Ctdnep1Q3TP92 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.02□□□□□ -0.16
Ctdnep1Q3TP92 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ctdnep1Q3TP92 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.02□□□□□ -0.17
Ctdnep1Q3TP92 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ctdnep1Q3TP92 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ctdnep1Q3TP92 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ctdnep1Q3TP92 Gm5419-201ENSMUST00000119301 527 ntBASIC14.02□□□□□ -0.17
Ctdnep1Q3TP92 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ctdnep1Q3TP92 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ctdnep1Q3TP92 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.02□□□□□ -0.17
Ctdnep1Q3TP92 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.02□□□□□ -0.17
Ctdnep1Q3TP92 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ctdnep1Q3TP92 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.02□□□□□ -0.17
Ctdnep1Q3TP92 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.02□□□□□ -0.17
Ctdnep1Q3TP92 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms