Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Gm25483-201ENSMUST00000083224 227 ntBASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Ssr1-203ENSMUST00000225246 1825 ntBASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Gm15132-201ENSMUST00000118581 652 ntBASIC6.23□□□□□ -1.41
Ush2AQ2QI47 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 2010009K17Rik-201ENSMUST00000186977 567 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Gm37723-201ENSMUST00000194480 565 ntBASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Gm19918-201ENSMUST00000194858 400 ntBASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ush2AQ2QI47 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm37270-201ENSMUST00000194277 330 ntBASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Adra1a-206ENSMUST00000225182 2337 ntBASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm27196-201ENSMUST00000184787 2582 ntBASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm6276-201ENSMUST00000120159 579 ntBASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm37486-201ENSMUST00000195663 405 ntBASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm45199-201ENSMUST00000207640 1507 ntBASIC6.22□□□□□ -1.41
Ush2AQ2QI47 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm38301-201ENSMUST00000195573 543 ntBASIC6.22□□□□□ -1.41
Ush2AQ2QI47 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Gm7642-201ENSMUST00000216345 1809 ntBASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Retreg1-206ENSMUST00000228306 1430 ntBASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.22□□□□□ -1.41
Ush2AQ2QI47 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms