Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.81□□□□□ -0.36
Cntn3Q07409 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cntn3Q07409 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.81□□□□□ -0.36
Cntn3Q07409 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.81□□□□□ -0.36
Cntn3Q07409 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.81□□□□□ -0.36
Cntn3Q07409 Gm17812-201ENSMUST00000204935 318 ntBASIC12.81□□□□□ -0.36
Cntn3Q07409 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Gm45433-201ENSMUST00000209386 247 ntBASIC12.81□□□□□ -0.36
Cntn3Q07409 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.81□□□□□ -0.36
Cntn3Q07409 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Cntn3Q07409 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cntn3Q07409 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cntn3Q07409 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cntn3Q07409 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.8□□□□□ -0.36
Cntn3Q07409 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.8□□□□□ -0.36
Cntn3Q07409 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cntn3Q07409 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.8□□□□□ -0.36
Cntn3Q07409 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cntn3Q07409 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Cntn3Q07409 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cntn3Q07409 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.8□□□□□ -0.36
Cntn3Q07409 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Gm12217-201ENSMUST00000118858 696 ntBASIC12.8□□□□□ -0.36
Cntn3Q07409 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cntn3Q07409 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.8□□□□□ -0.36
Cntn3Q07409 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.8□□□□□ -0.36
Cntn3Q07409 Mir5132-201ENSMUST00000175166 71 ntBASIC12.8□□□□□ -0.36
Cntn3Q07409 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.8□□□□□ -0.36
Cntn3Q07409 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.8□□□□□ -0.36
Cntn3Q07409 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.8□□□□□ -0.36
Cntn3Q07409 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.8□□□□□ -0.36
Cntn3Q07409 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cntn3Q07409 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.8□□□□□ -0.36
Cntn3Q07409 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cntn3Q07409 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.8□□□□□ -0.36
Cntn3Q07409 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Cntn3Q07409 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cntn3Q07409 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.8□□□□□ -0.36
Cntn3Q07409 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.8□□□□□ -0.36
Cntn3Q07409 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cntn3Q07409 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn3Q07409 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn3Q07409 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn3Q07409 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn3Q07409 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.79□□□□□ -0.36
Cntn3Q07409 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn3Q07409 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn3Q07409 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn3Q07409 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn3Q07409 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn3Q07409 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn3Q07409 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.79□□□□□ -0.36
Cntn3Q07409 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn3Q07409 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn3Q07409 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn3Q07409 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn3Q07409 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Cntn3Q07409 Gm24749-201ENSMUST00000157838 343 ntBASIC12.79□□□□□ -0.36
Cntn3Q07409 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.79□□□□□ -0.36
Cntn3Q07409 Gm20614-201ENSMUST00000177106 632 ntBASIC12.79□□□□□ -0.36
Cntn3Q07409 Gm19087-201ENSMUST00000191430 946 ntBASIC12.79□□□□□ -0.36
Cntn3Q07409 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cntn3Q07409 Gm19208-201ENSMUST00000213861 912 ntBASIC12.79□□□□□ -0.36
Cntn3Q07409 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms