Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox4Q06831 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Sox4Q06831 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12□□□□□ -0.49
Sox4Q06831 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Gm23912-201ENSMUST00000104687 87 ntBASIC12□□□□□ -0.49
Sox4Q06831 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Sox4Q06831 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12□□□□□ -0.49
Sox4Q06831 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12□□□□□ -0.49
Sox4Q06831 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12□□□□□ -0.49
Sox4Q06831 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12□□□□□ -0.49
Sox4Q06831 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12□□□□□ -0.49
Sox4Q06831 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sox4Q06831 Gm45484-201ENSMUST00000210310 1141 ntBASIC12□□□□□ -0.49
Sox4Q06831 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12□□□□□ -0.49
Sox4Q06831 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12□□□□□ -0.49
Sox4Q06831 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sox4Q06831 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sox4Q06831 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sox4Q06831 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Gm29100-201ENSMUST00000187564 4410 ntBASIC12□□□□□ -0.49
Sox4Q06831 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox4Q06831 Pck2-205ENSMUST00000226352 2784 ntBASIC12□□□□□ -0.49
Sox4Q06831 Gm37472-201ENSMUST00000192342 4052 ntBASIC12□□□□□ -0.49
Sox4Q06831 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sox4Q06831 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 Gm7722-201ENSMUST00000120646 741 ntBASIC11.99□□□□□ -0.49
Sox4Q06831 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.99□□□□□ -0.49
Sox4Q06831 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sox4Q06831 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 Gm18711-201ENSMUST00000199341 750 ntBASIC11.99□□□□□ -0.49
Sox4Q06831 Gm45186-201ENSMUST00000206874 478 ntBASIC11.99□□□□□ -0.49
Sox4Q06831 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Gm8913-201ENSMUST00000209491 641 ntBASIC11.99□□□□□ -0.49
Sox4Q06831 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Mir433-201ENSMUST00000093564 124 ntBASIC11.99□□□□□ -0.49
Sox4Q06831 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox4Q06831 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
Sox4Q06831 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox4Q06831 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms