Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Pfdn6Q03958 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Pfdn6Q03958 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn6Q03958 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn6Q03958 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn6Q03958 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn6Q03958 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn6Q03958 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn6Q03958 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn6Q03958 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn6Q03958 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pfdn6Q03958 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.27□□□□□ -0.45
Pfdn6Q03958 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Gm14999-201ENSMUST00000121039 624 ntBASIC12.27□□□□□ -0.45
Pfdn6Q03958 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.27□□□□□ -0.45
Pfdn6Q03958 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.27□□□□□ -0.45
Pfdn6Q03958 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.27□□□□□ -0.45
Pfdn6Q03958 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pfdn6Q03958 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.26□□□□□ -0.45
Pfdn6Q03958 Gm5187-201ENSMUST00000117317 991 ntBASIC12.26□□□□□ -0.45
Pfdn6Q03958 Gm12742-201ENSMUST00000117326 410 ntBASIC12.26□□□□□ -0.45
Pfdn6Q03958 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Gm13570-201ENSMUST00000140763 309 ntBASIC12.26□□□□□ -0.45
Pfdn6Q03958 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Gm42693-201ENSMUST00000196779 631 ntBASIC12.26□□□□□ -0.45
Pfdn6Q03958 Gm43133-201ENSMUST00000197472 463 ntBASIC12.26□□□□□ -0.45
Pfdn6Q03958 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.26□□□□□ -0.45
Pfdn6Q03958 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pfdn6Q03958 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pfdn6Q03958 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms