Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Msx2Q03358 Gm14057-201ENSMUST00000120631 482 ntBASIC11.81□□□□□ -0.52
Msx2Q03358 Gm12363-201ENSMUST00000122250 668 ntBASIC11.81□□□□□ -0.52
Msx2Q03358 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.81□□□□□ -0.52
Msx2Q03358 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.81□□□□□ -0.52
Msx2Q03358 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Msx2Q03358 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.81□□□□□ -0.52
Msx2Q03358 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.81□□□□□ -0.52
Msx2Q03358 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.81□□□□□ -0.52
Msx2Q03358 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Msx2Q03358 Gm2423-201ENSMUST00000074863 733 ntBASIC11.81□□□□□ -0.52
Msx2Q03358 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.81□□□□□ -0.52
Msx2Q03358 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Msx2Q03358 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.8□□□□□ -0.52
Msx2Q03358 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Msx2Q03358 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Msx2Q03358 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Msx2Q03358 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Gm11803-201ENSMUST00000119966 444 ntBASIC11.8□□□□□ -0.52
Msx2Q03358 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.8□□□□□ -0.52
Msx2Q03358 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Msx2Q03358 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Gm27243-201ENSMUST00000183964 521 ntBASIC11.8□□□□□ -0.52
Msx2Q03358 Gm19087-201ENSMUST00000191430 946 ntBASIC11.8□□□□□ -0.52
Msx2Q03358 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.8□□□□□ -0.52
Msx2Q03358 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.8□□□□□ -0.52
Msx2Q03358 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Msx2Q03358 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.8□□□□□ -0.52
Msx2Q03358 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Msx2Q03358 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msx2Q03358 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msx2Q03358 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msx2Q03358 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msx2Q03358 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Msx2Q03358 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msx2Q03358 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msx2Q03358 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.79□□□□□ -0.52
Msx2Q03358 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
Msx2Q03358 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msx2Q03358 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.79□□□□□ -0.52
Msx2Q03358 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Msx2Q03358 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msx2Q03358 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.79□□□□□ -0.52
Msx2Q03358 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msx2Q03358 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msx2Q03358 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.79□□□□□ -0.52
Msx2Q03358 Gm12203-201ENSMUST00000118235 598 ntBASIC11.79□□□□□ -0.52
Msx2Q03358 Gm12209-201ENSMUST00000120089 596 ntBASIC11.79□□□□□ -0.52
Msx2Q03358 Gm11637-201ENSMUST00000120601 592 ntBASIC11.79□□□□□ -0.52
Msx2Q03358 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msx2Q03358 Gm11597-201ENSMUST00000121423 964 ntBASIC11.79□□□□□ -0.52
Msx2Q03358 Gm2231-201ENSMUST00000125661 612 ntBASIC11.79□□□□□ -0.52
Msx2Q03358 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.79□□□□□ -0.52
Msx2Q03358 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msx2Q03358 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msx2Q03358 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msx2Q03358 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.79□□□□□ -0.52
Msx2Q03358 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.79□□□□□ -0.52
Msx2Q03358 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.79□□□□□ -0.52
Msx2Q03358 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms