Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx3-2P97503 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Gm4909-201ENSMUST00000118749 794 ntBASIC11.57□□□□□ -0.56
Nkx3-2P97503 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Gm6963-201ENSMUST00000147879 379 ntBASIC11.57□□□□□ -0.56
Nkx3-2P97503 Gm24990-201ENSMUST00000157406 323 ntBASIC11.57□□□□□ -0.56
Nkx3-2P97503 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.57□□□□□ -0.56
Nkx3-2P97503 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Mir3102-201ENSMUST00000175555 104 ntBASIC11.57□□□□□ -0.56
Nkx3-2P97503 Mir7070-201ENSMUST00000183657 86 ntBASIC11.57□□□□□ -0.56
Nkx3-2P97503 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.57□□□□□ -0.56
Nkx3-2P97503 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx3-2P97503 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Gm13296-201ENSMUST00000117854 997 ntBASIC11.56□□□□□ -0.56
Nkx3-2P97503 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.56□□□□□ -0.56
Nkx3-2P97503 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Gm16505-201ENSMUST00000179981 232 ntBASIC11.56□□□□□ -0.56
Nkx3-2P97503 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Gm18304-201ENSMUST00000189162 546 ntBASIC11.56□□□□□ -0.56
Nkx3-2P97503 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Gm32999-201ENSMUST00000192693 562 ntBASIC11.56□□□□□ -0.56
Nkx3-2P97503 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.56□□□□□ -0.56
Nkx3-2P97503 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.56□□□□□ -0.56
Nkx3-2P97503 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.56□□□□□ -0.56
Nkx3-2P97503 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.56□□□□□ -0.56
Nkx3-2P97503 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx3-2P97503 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx3-2P97503 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms