Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lig3P97386 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lig3P97386 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lig3P97386 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lig3P97386 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.39□□□□□ -0.27
Lig3P97386 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.39□□□□□ -0.27
Lig3P97386 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lig3P97386 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lig3P97386 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lig3P97386 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Lig3P97386 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lig3P97386 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.38□□□□□ -0.27
Lig3P97386 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.38□□□□□ -0.27
Lig3P97386 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.38□□□□□ -0.27
Lig3P97386 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lig3P97386 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Lig3P97386 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Gm25700-201ENSMUST00000177693 110 ntBASIC13.38□□□□□ -0.27
Lig3P97386 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lig3P97386 Gm3096-201ENSMUST00000185770 364 ntBASIC13.38□□□□□ -0.27
Lig3P97386 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lig3P97386 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lig3P97386 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Lig3P97386 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.38□□□□□ -0.27
Lig3P97386 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lig3P97386 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lig3P97386 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lig3P97386 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.37□□□□□ -0.27
Lig3P97386 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lig3P97386 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.37□□□□□ -0.27
Lig3P97386 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Lig3P97386 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Lig3P97386 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Gm14665-201ENSMUST00000122294 557 ntBASIC13.37□□□□□ -0.27
Lig3P97386 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.37□□□□□ -0.27
Lig3P97386 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lig3P97386 Gm9211-201ENSMUST00000182882 975 ntBASIC13.37□□□□□ -0.27
Lig3P97386 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.37□□□□□ -0.27
Lig3P97386 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.37□□□□□ -0.27
Lig3P97386 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.37□□□□□ -0.27
Lig3P97386 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.37□□□□□ -0.27
Lig3P97386 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.37□□□□□ -0.27
Lig3P97386 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lig3P97386 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lig3P97386 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Lig3P97386 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Lig3P97386 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.36□□□□□ -0.27
Lig3P97386 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lig3P97386 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Lig3P97386 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.36□□□□□ -0.27
Lig3P97386 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Lig3P97386 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.36□□□□□ -0.27
Lig3P97386 Gm45770-201ENSMUST00000212105 616 ntBASIC13.36□□□□□ -0.27
Lig3P97386 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Lig3P97386 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms