Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim43bP86448 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trim43bP86448 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Trim43bP86448 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trim43bP86448 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.56□□□□□ -0.4
Trim43bP86448 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim43bP86448 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trim43bP86448 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.56□□□□□ -0.4
Trim43bP86448 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.56□□□□□ -0.4
Trim43bP86448 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim43bP86448 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim43bP86448 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Trim43bP86448 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trim43bP86448 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim43bP86448 Gm8099-201ENSMUST00000200510 742 ntBASIC12.56□□□□□ -0.4
Trim43bP86448 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim43bP86448 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim43bP86448 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Trim43bP86448 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Trim43bP86448 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim43bP86448 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim43bP86448 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43bP86448 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim43bP86448 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim43bP86448 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim43bP86448 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim43bP86448 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim43bP86448 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim43bP86448 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim43bP86448 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trim43bP86448 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim43bP86448 Gm11591-201ENSMUST00000120063 702 ntBASIC12.55□□□□□ -0.4
Trim43bP86448 Gm11793-201ENSMUST00000120433 981 ntBASIC12.55□□□□□ -0.4
Trim43bP86448 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim43bP86448 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim43bP86448 Gm24548-201ENSMUST00000158650 108 ntBASIC12.55□□□□□ -0.4
Trim43bP86448 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim43bP86448 Gm17208-201ENSMUST00000168388 535 ntBASIC12.55□□□□□ -0.4
Trim43bP86448 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim43bP86448 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim43bP86448 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.55□□□□□ -0.4
Trim43bP86448 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim43bP86448 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.55□□□□□ -0.4
Trim43bP86448 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim43bP86448 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trim43bP86448 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms