Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm19187-201ENSMUST00000206781 892 ntBASIC10.87□□□□□ -0.67
H3f3aP84244 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.87□□□□□ -0.67
H3f3aP84244 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.87□□□□□ -0.67
H3f3aP84244 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.87□□□□□ -0.67
H3f3aP84244 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.87□□□□□ -0.67
H3f3aP84244 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.87□□□□□ -0.67
H3f3aP84244 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.87□□□□□ -0.67
H3f3aP84244 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
H3f3aP84244 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
H3f3aP84244 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.87□□□□□ -0.67
H3f3aP84244 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
H3f3aP84244 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H3f3aP84244 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.86□□□□□ -0.67
H3f3aP84244 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.86□□□□□ -0.67
H3f3aP84244 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
H3f3aP84244 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.86□□□□□ -0.67
H3f3aP84244 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.86□□□□□ -0.67
H3f3aP84244 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
H3f3aP84244 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.86□□□□□ -0.67
H3f3aP84244 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
H3f3aP84244 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.86□□□□□ -0.67
H3f3aP84244 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.86□□□□□ -0.67
H3f3aP84244 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.86□□□□□ -0.67
H3f3aP84244 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
H3f3aP84244 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.86□□□□□ -0.67
H3f3aP84244 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
H3f3aP84244 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
H3f3aP84244 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H3f3aP84244 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H3f3aP84244 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H3f3aP84244 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H3f3aP84244 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H3f3aP84244 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H3f3aP84244 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H3f3aP84244 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H3f3aP84244 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H3f3aP84244 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H3f3aP84244 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H3f3aP84244 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H3f3aP84244 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H3f3aP84244 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H3f3aP84244 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms