Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Otx1P80205 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Otx1P80205 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Otx1P80205 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Otx1P80205 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Otx1P80205 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Otx1P80205 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Otx1P80205 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Otx1P80205 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Otx1P80205 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Otx1P80205 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Otx1P80205 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.54□□□□□ -0.72
Otx1P80205 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.53□□□□□ -0.72
Otx1P80205 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.53□□□□□ -0.72
Otx1P80205 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Otx1P80205 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.53□□□□□ -0.72
Otx1P80205 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Otx1P80205 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Mir877-201ENSMUST00000104738 85 ntBASIC10.53□□□□□ -0.72
Otx1P80205 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.53□□□□□ -0.72
Otx1P80205 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Gm2991-201ENSMUST00000173338 480 ntBASIC10.53□□□□□ -0.72
Otx1P80205 Gm26956-201ENSMUST00000182176 986 ntBASIC10.53□□□□□ -0.72
Otx1P80205 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.53□□□□□ -0.72
Otx1P80205 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.53□□□□□ -0.72
Otx1P80205 Gm37259-201ENSMUST00000193903 849 ntBASIC10.53□□□□□ -0.72
Otx1P80205 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.53□□□□□ -0.72
Otx1P80205 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.53□□□□□ -0.72
Otx1P80205 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.53□□□□□ -0.72
Otx1P80205 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Otx1P80205 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.53□□□□□ -0.72
Otx1P80205 Gm9996-201ENSMUST00000070359 913 ntBASIC10.53□□□□□ -0.72
Otx1P80205 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Otx1P80205 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.53□□□□□ -0.72
Otx1P80205 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Otx1P80205 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Otx1P80205 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.52□□□□□ -0.72
Otx1P80205 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Otx1P80205 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Otx1P80205 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Otx1P80205 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.52□□□□□ -0.72
Otx1P80205 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Otx1P80205 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Otx1P80205 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Otx1P80205 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Otx1P80205 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Otx1P80205 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Otx1P80205 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Otx1P80205 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Otx1P80205 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Otx1P80205 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Otx1P80205 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Otx1P80205 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Otx1P80205 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Otx1P80205 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Otx1P80205 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Otx1P80205 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Otx1P80205 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Otx1P80205 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Otx1P80205 Gm14726-201ENSMUST00000120623 896 ntBASIC10.52□□□□□ -0.73
Otx1P80205 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.52□□□□□ -0.73
Otx1P80205 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
Otx1P80205 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.52□□□□□ -0.73
Otx1P80205 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Otx1P80205 Gm29199-201ENSMUST00000187766 775 ntBASIC10.52□□□□□ -0.73
Otx1P80205 Gm6621-201ENSMUST00000193251 772 ntBASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms