Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Shox2P70390 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Shox2P70390 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Shox2P70390 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.02□□□□□ -0.49
Shox2P70390 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.02□□□□□ -0.49
Shox2P70390 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shox2P70390 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Shox2P70390 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Shox2P70390 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.01□□□□□ -0.49
Shox2P70390 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Shox2P70390 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.01□□□□□ -0.49
Shox2P70390 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Shox2P70390 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.01□□□□□ -0.49
Shox2P70390 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.01□□□□□ -0.49
Shox2P70390 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.01□□□□□ -0.49
Shox2P70390 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Gm18304-201ENSMUST00000189162 546 ntBASIC12.01□□□□□ -0.49
Shox2P70390 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Shox2P70390 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Shox2P70390 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.01□□□□□ -0.49
Shox2P70390 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Shox2P70390 Gm24526-201ENSMUST00000082921 158 ntBASIC12.01□□□□□ -0.49
Shox2P70390 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.01□□□□□ -0.49
Shox2P70390 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.01□□□□□ -0.49
Shox2P70390 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Shox2P70390 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.01□□□□□ -0.49
Shox2P70390 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shox2P70390 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Shox2P70390 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Shox2P70390 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Shox2P70390 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12□□□□□ -0.49
Shox2P70390 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Shox2P70390 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Gm43242-201ENSMUST00000199507 1776 ntBASIC12□□□□□ -0.49
Shox2P70390 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12□□□□□ -0.49
Shox2P70390 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Shox2P70390 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Shox2P70390 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12□□□□□ -0.49
Shox2P70390 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12□□□□□ -0.49
Shox2P70390 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Shox2P70390 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Shox2P70390 Gm11637-201ENSMUST00000120601 592 ntBASIC12□□□□□ -0.49
Shox2P70390 Gm11597-201ENSMUST00000121423 964 ntBASIC12□□□□□ -0.49
Shox2P70390 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12□□□□□ -0.49
Shox2P70390 Gm17208-201ENSMUST00000168388 535 ntBASIC12□□□□□ -0.49
Shox2P70390 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Shox2P70390 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12□□□□□ -0.49
Shox2P70390 Chchd1-203ENSMUST00000224633 557 ntBASIC12□□□□□ -0.49
Shox2P70390 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Shox2P70390 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms