Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm5P62322 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm5P62322 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Lsm5P62322 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Lsm5P62322 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.12□□□□□ -0.79
Lsm5P62322 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Lsm5P62322 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm5P62322 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm5P62322 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm5P62322 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Lsm5P62322 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm5P62322 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm5P62322 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm5P62322 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm5P62322 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.12□□□□□ -0.79
Lsm5P62322 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm5P62322 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm5P62322 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Lsm5P62322 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Lsm5P62322 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm5P62322 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm5P62322 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.12□□□□□ -0.79
Lsm5P62322 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lsm5P62322 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Lsm5P62322 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Lsm5P62322 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Lsm5P62322 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Lsm5P62322 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Lsm5P62322 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.11□□□□□ -0.79
Lsm5P62322 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.11□□□□□ -0.79
Lsm5P62322 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Lsm5P62322 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.11□□□□□ -0.79
Lsm5P62322 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.11□□□□□ -0.79
Lsm5P62322 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.11□□□□□ -0.79
Lsm5P62322 Gm5687-201ENSMUST00000118252 640 ntBASIC10.11□□□□□ -0.79
Lsm5P62322 Gm15703-201ENSMUST00000120250 880 ntBASIC10.11□□□□□ -0.79
Lsm5P62322 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.11□□□□□ -0.79
Lsm5P62322 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Lsm5P62322 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.11□□□□□ -0.79
Lsm5P62322 Gm5354-201ENSMUST00000182417 973 ntBASIC10.11□□□□□ -0.79
Lsm5P62322 Gm27741-201ENSMUST00000185060 237 ntBASIC10.11□□□□□ -0.79
Lsm5P62322 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.11□□□□□ -0.79
Lsm5P62322 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.11□□□□□ -0.79
Lsm5P62322 Gm44397-201ENSMUST00000195950 113 ntBASIC10.11□□□□□ -0.79
Lsm5P62322 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.11□□□□□ -0.79
Lsm5P62322 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.11□□□□□ -0.79
Lsm5P62322 Gm6983-201ENSMUST00000214912 628 ntBASIC10.11□□□□□ -0.79
Lsm5P62322 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.11□□□□□ -0.79
Lsm5P62322 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.11□□□□□ -0.79
Lsm5P62322 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Lsm5P62322 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Lsm5P62322 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm5P62322 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm5P62322 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Lsm5P62322 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Lsm5P62322 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm5P62322 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Lsm5P62322 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.1□□□□□ -0.79
Lsm5P62322 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm5P62322 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm5P62322 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.1□□□□□ -0.79
Lsm5P62322 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm5P62322 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm5P62322 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm5P62322 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm5P62322 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm5P62322 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.1□□□□□ -0.79
Lsm5P62322 Gm12384-201ENSMUST00000119228 919 ntBASIC10.1□□□□□ -0.79
Lsm5P62322 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm5P62322 Gm4034-201ENSMUST00000187674 480 ntBASIC10.1□□□□□ -0.79
Lsm5P62322 Gm8099-201ENSMUST00000200510 742 ntBASIC10.1□□□□□ -0.79
Lsm5P62322 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.1□□□□□ -0.79
Lsm5P62322 Gm8396-201ENSMUST00000057361 823 ntBASIC10.1□□□□□ -0.79
Lsm5P62322 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.1□□□□□ -0.79
Lsm5P62322 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm5P62322 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm5P62322 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms