Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm44069-201ENSMUST00000204898 506 ntBASIC11.07□□□□□ -0.64
Lsm3P62311 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Lsm3P62311 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.07□□□□□ -0.64
Lsm3P62311 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.07□□□□□ -0.64
Lsm3P62311 Gm6888-201ENSMUST00000221983 706 ntBASIC11.07□□□□□ -0.64
Lsm3P62311 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.07□□□□□ -0.64
Lsm3P62311 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Rgr-203ENSMUST00000225070 4704 ntBASIC11.07□□□□□ -0.64
Lsm3P62311 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.07□□□□□ -0.64
Lsm3P62311 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lsm3P62311 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.06□□□□□ -0.64
Lsm3P62311 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.06□□□□□ -0.64
Lsm3P62311 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Lsm3P62311 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.06□□□□□ -0.64
Lsm3P62311 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.06□□□□□ -0.64
Lsm3P62311 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Lsm3P62311 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Lsm3P62311 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.06□□□□□ -0.64
Lsm3P62311 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Lsm3P62311 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Lsm3P62311 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.06□□□□□ -0.64
Lsm3P62311 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.06□□□□□ -0.64
Lsm3P62311 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.06□□□□□ -0.64
Lsm3P62311 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.06□□□□□ -0.64
Lsm3P62311 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.06□□□□□ -0.64
Lsm3P62311 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.06□□□□□ -0.64
Lsm3P62311 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.06□□□□□ -0.64
Lsm3P62311 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm3P62311 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Lsm3P62311 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.05□□□□□ -0.64
Lsm3P62311 Gm24231-201ENSMUST00000104315 133 ntBASIC11.05□□□□□ -0.64
Lsm3P62311 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lsm3P62311 Gm14767-201ENSMUST00000121559 586 ntBASIC11.05□□□□□ -0.64
Lsm3P62311 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.05□□□□□ -0.64
Lsm3P62311 Gm27680-201ENSMUST00000184192 160 ntBASIC11.05□□□□□ -0.64
Lsm3P62311 Gm38223-201ENSMUST00000194484 695 ntBASIC11.05□□□□□ -0.64
Lsm3P62311 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Gm5279-201ENSMUST00000199575 745 ntBASIC11.05□□□□□ -0.64
Lsm3P62311 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.05□□□□□ -0.64
Lsm3P62311 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.05□□□□□ -0.64
Lsm3P62311 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Lsm3P62311 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Lsm3P62311 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Lsm3P62311 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Lsm3P62311 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.05□□□□□ -0.64
Lsm3P62311 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.05□□□□□ -0.64
Lsm3P62311 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Lsm3P62311 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm3P62311 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Lsm3P62311 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm3P62311 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms