Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.83□□□□□ -0.84
Lmo4P61969 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Lmo4P61969 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Lmo4P61969 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC9.83□□□□□ -0.84
Lmo4P61969 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Lmo4P61969 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.83□□□□□ -0.84
Lmo4P61969 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC9.83□□□□□ -0.84
Lmo4P61969 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.83□□□□□ -0.84
Lmo4P61969 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.83□□□□□ -0.84
Lmo4P61969 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC9.83□□□□□ -0.84
Lmo4P61969 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC9.83□□□□□ -0.84
Lmo4P61969 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC9.83□□□□□ -0.84
Lmo4P61969 Gm43916-201ENSMUST00000205062 967 ntBASIC9.83□□□□□ -0.84
Lmo4P61969 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Lmo4P61969 Gm45575-201ENSMUST00000210283 548 ntBASIC9.83□□□□□ -0.84
Lmo4P61969 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.83□□□□□ -0.84
Lmo4P61969 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Lmo4P61969 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Lmo4P61969 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Lmo4P61969 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lmo4P61969 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm38385-201ENSMUST00000194454 2351 ntBASIC9.82□□□□□ -0.84
Lmo4P61969 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Lmo4P61969 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm13263-201ENSMUST00000121271 838 ntBASIC9.82□□□□□ -0.84
Lmo4P61969 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm17391-201ENSMUST00000171036 126 ntBASIC9.82□□□□□ -0.84
Lmo4P61969 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC9.82□□□□□ -0.84
Lmo4P61969 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Lmo4P61969 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm44126-201ENSMUST00000204831 514 ntBASIC9.82□□□□□ -0.84
Lmo4P61969 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.82□□□□□ -0.84
Lmo4P61969 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.82□□□□□ -0.84
Lmo4P61969 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm10179-201ENSMUST00000086233 688 ntBASIC9.82□□□□□ -0.84
Lmo4P61969 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Lmo4P61969 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Lmo4P61969 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 Gm38094-201ENSMUST00000195864 2978 ntBASIC9.82□□□□□ -0.84
Lmo4P61969 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lmo4P61969 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC9.82□□□□□ -0.84
Lmo4P61969 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms