Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tpm1P58771 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tpm1P58771 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Tpm1P58771 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Tpm1P58771 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Tpm1P58771 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.58□□□□□ -0.24
Tpm1P58771 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Tpm1P58771 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Gm44882-201ENSMUST00000205702 802 ntBASIC13.58□□□□□ -0.24
Tpm1P58771 Gm45668-201ENSMUST00000211271 493 ntBASIC13.58□□□□□ -0.24
Tpm1P58771 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.58□□□□□ -0.24
Tpm1P58771 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.58□□□□□ -0.24
Tpm1P58771 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.58□□□□□ -0.24
Tpm1P58771 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.58□□□□□ -0.24
Tpm1P58771 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Tpm1P58771 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Tpm1P58771 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Tpm1P58771 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.58□□□□□ -0.24
Tpm1P58771 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Tpm1P58771 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tpm1P58771 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.57□□□□□ -0.24
Tpm1P58771 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.57□□□□□ -0.24
Tpm1P58771 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Tpm1P58771 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Tpm1P58771 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.57□□□□□ -0.24
Tpm1P58771 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.57□□□□□ -0.24
Tpm1P58771 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Gm7488-201ENSMUST00000117148 684 ntBASIC13.57□□□□□ -0.24
Tpm1P58771 Gm28911-201ENSMUST00000188837 117 ntBASIC13.57□□□□□ -0.24
Tpm1P58771 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.57□□□□□ -0.24
Tpm1P58771 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.57□□□□□ -0.24
Tpm1P58771 Gm7287-201ENSMUST00000205267 602 ntBASIC13.57□□□□□ -0.24
Tpm1P58771 Gm4768-201ENSMUST00000206199 686 ntBASIC13.57□□□□□ -0.24
Tpm1P58771 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Tpm1P58771 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Gm24136-201ENSMUST00000083374 165 ntBASIC13.57□□□□□ -0.24
Tpm1P58771 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Tpm1P58771 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.57□□□□□ -0.24
Tpm1P58771 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Tpm1P58771 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Tpm1P58771 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Tpm1P58771 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tpm1P58771 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.56□□□□□ -0.24
Tpm1P58771 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Tpm1P58771 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Tpm1P58771 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Gm13369-201ENSMUST00000119442 987 ntBASIC13.56□□□□□ -0.24
Tpm1P58771 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.56□□□□□ -0.24
Tpm1P58771 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Tpm1P58771 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Tpm1P58771 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.56□□□□□ -0.24
Tpm1P58771 Gm37497-201ENSMUST00000195830 798 ntBASIC13.56□□□□□ -0.24
Tpm1P58771 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.56□□□□□ -0.24
Tpm1P58771 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.56□□□□□ -0.24
Tpm1P58771 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Tpm1P58771 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tpm1P58771 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms