Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atxn1P54254 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Atxn1P54254 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Atxn1P54254 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Atxn1P54254 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Atxn1P54254 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Atxn1P54254 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Atxn1P54254 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Atxn1P54254 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.14□□□□□ -0.47
Atxn1P54254 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.14□□□□□ -0.47
Atxn1P54254 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Atxn1P54254 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Atxn1P54254 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.14□□□□□ -0.47
Atxn1P54254 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.14□□□□□ -0.47
Atxn1P54254 Gm23218-201ENSMUST00000158124 276 ntBASIC12.14□□□□□ -0.47
Atxn1P54254 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.14□□□□□ -0.47
Atxn1P54254 Gm20392-201ENSMUST00000173047 701 ntBASIC12.14□□□□□ -0.47
Atxn1P54254 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.14□□□□□ -0.47
Atxn1P54254 Gm8018-201ENSMUST00000173536 789 ntBASIC12.14□□□□□ -0.47
Atxn1P54254 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.14□□□□□ -0.47
Atxn1P54254 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.14□□□□□ -0.47
Atxn1P54254 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Atxn1P54254 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Atxn1P54254 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.14□□□□□ -0.47
Atxn1P54254 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atxn1P54254 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.13□□□□□ -0.47
Atxn1P54254 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.13□□□□□ -0.47
Atxn1P54254 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.13□□□□□ -0.47
Atxn1P54254 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Atxn1P54254 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Atxn1P54254 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Atxn1P54254 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Atxn1P54254 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.13□□□□□ -0.47
Atxn1P54254 Gm15573-201ENSMUST00000119487 540 ntBASIC12.13□□□□□ -0.47
Atxn1P54254 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.13□□□□□ -0.47
Atxn1P54254 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Mir6998-201ENSMUST00000183343 64 ntBASIC12.13□□□□□ -0.47
Atxn1P54254 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Atxn1P54254 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.13□□□□□ -0.47
Atxn1P54254 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Atxn1P54254 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.13□□□□□ -0.47
Atxn1P54254 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.13□□□□□ -0.47
Atxn1P54254 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.13□□□□□ -0.47
Atxn1P54254 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Atxn1P54254 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Atxn1P54254 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.13□□□□□ -0.47
Atxn1P54254 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Atxn1P54254 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atxn1P54254 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms