Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sox1P53783 Gm13204-201ENSMUST00000120110 821 ntBASIC12.45□□□□□ -0.42
Sox1P53783 Gm15620-201ENSMUST00000122949 270 ntBASIC12.45□□□□□ -0.42
Sox1P53783 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.45□□□□□ -0.42
Sox1P53783 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.45□□□□□ -0.42
Sox1P53783 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox1P53783 Gm21156-201ENSMUST00000189693 869 ntBASIC12.45□□□□□ -0.42
Sox1P53783 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.45□□□□□ -0.42
Sox1P53783 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox1P53783 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Sox1P53783 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sox1P53783 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
Sox1P53783 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox1P53783 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox1P53783 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.45□□□□□ -0.42
Sox1P53783 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Sox1P53783 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC12.44□□□□□ -0.42
Sox1P53783 Gm12906-201ENSMUST00000154610 441 ntBASIC12.44□□□□□ -0.42
Sox1P53783 Gm24844-201ENSMUST00000158679 127 ntBASIC12.44□□□□□ -0.42
Sox1P53783 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.44□□□□□ -0.42
Sox1P53783 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.44□□□□□ -0.42
Sox1P53783 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12.44□□□□□ -0.42
Sox1P53783 Gm37782-201ENSMUST00000194879 678 ntBASIC12.44□□□□□ -0.42
Sox1P53783 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.44□□□□□ -0.42
Sox1P53783 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.44□□□□□ -0.42
Sox1P53783 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.44□□□□□ -0.42
Sox1P53783 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox1P53783 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sox1P53783 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Sox1P53783 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Sox1P53783 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.44□□□□□ -0.42
Sox1P53783 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Sox1P53783 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.44□□□□□ -0.42
Sox1P53783 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox1P53783 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox1P53783 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.43□□□□□ -0.42
Sox1P53783 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.43□□□□□ -0.42
Sox1P53783 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.43□□□□□ -0.42
Sox1P53783 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox1P53783 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox1P53783 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sox1P53783 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox1P53783 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox1P53783 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox1P53783 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Gm8815-201ENSMUST00000173809 620 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms