Protein–RNA interactions for Protein: P51670

Ccl9, C-C motif chemokine 9, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl9P51670 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ccl9P51670 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl9P51670 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl9P51670 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl9P51670 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl9P51670 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl9P51670 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ccl9P51670 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl9P51670 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl9P51670 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.69□□□□□ -0.7
Ccl9P51670 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl9P51670 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl9P51670 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ccl9P51670 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl9P51670 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl9P51670 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl9P51670 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccl9P51670 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Ccl9P51670 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Ccl9P51670 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.68□□□□□ -0.7
Ccl9P51670 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.68□□□□□ -0.7
Ccl9P51670 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ccl9P51670 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ccl9P51670 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.68□□□□□ -0.7
Ccl9P51670 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.68□□□□□ -0.7
Ccl9P51670 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.68□□□□□ -0.7
Ccl9P51670 Gm13226-201ENSMUST00000117838 404 ntBASIC10.68□□□□□ -0.7
Ccl9P51670 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.68□□□□□ -0.7
Ccl9P51670 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.68□□□□□ -0.7
Ccl9P51670 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ccl9P51670 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.68□□□□□ -0.7
Ccl9P51670 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.68□□□□□ -0.7
Ccl9P51670 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ccl9P51670 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ccl9P51670 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.68□□□□□ -0.7
Ccl9P51670 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.68□□□□□ -0.7
Ccl9P51670 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.68□□□□□ -0.7
Ccl9P51670 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Ccl9P51670 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.68□□□□□ -0.7
Ccl9P51670 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.68□□□□□ -0.7
Ccl9P51670 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccl9P51670 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ccl9P51670 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccl9P51670 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ccl9P51670 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Gm22018-201ENSMUST00000104357 131 ntBASIC10.67□□□□□ -0.7
Ccl9P51670 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccl9P51670 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ccl9P51670 Gm13736-201ENSMUST00000119272 253 ntBASIC10.67□□□□□ -0.7
Ccl9P51670 Gm15824-201ENSMUST00000119516 955 ntBASIC10.67□□□□□ -0.7
Ccl9P51670 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.67□□□□□ -0.7
Ccl9P51670 Gm45784-201ENSMUST00000188360 142 ntBASIC10.67□□□□□ -0.7
Ccl9P51670 Gm18304-201ENSMUST00000189162 546 ntBASIC10.67□□□□□ -0.7
Ccl9P51670 Gm37008-201ENSMUST00000195712 319 ntBASIC10.67□□□□□ -0.7
Ccl9P51670 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.67□□□□□ -0.7
Ccl9P51670 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Gm45925-201ENSMUST00000218882 744 ntBASIC10.67□□□□□ -0.7
Ccl9P51670 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.67□□□□□ -0.7
Ccl9P51670 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ccl9P51670 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccl9P51670 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms