Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm26982-201ENSMUST00000182250 1151 ntBASIC13.45□□□□□ -0.26
Brca1P48754 Gm30671-201ENSMUST00000214898 318 ntBASIC13.45□□□□□ -0.26
Brca1P48754 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.45□□□□□ -0.26
Brca1P48754 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Brca1P48754 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brca1P48754 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Brca1P48754 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Brca1P48754 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Brca1P48754 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.44□□□□□ -0.26
Brca1P48754 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Brca1P48754 Gm12179-201ENSMUST00000118344 1272 ntBASIC13.44□□□□□ -0.26
Brca1P48754 Gm12036-201ENSMUST00000120008 530 ntBASIC13.44□□□□□ -0.26
Brca1P48754 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Gm20495-201ENSMUST00000173902 235 ntBASIC13.44□□□□□ -0.26
Brca1P48754 Gm37852-201ENSMUST00000193027 350 ntBASIC13.44□□□□□ -0.26
Brca1P48754 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC13.44□□□□□ -0.26
Brca1P48754 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.44□□□□□ -0.26
Brca1P48754 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.44□□□□□ -0.26
Brca1P48754 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.44□□□□□ -0.26
Brca1P48754 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.44□□□□□ -0.26
Brca1P48754 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Brca1P48754 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.44□□□□□ -0.26
Brca1P48754 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.44□□□□□ -0.26
Brca1P48754 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Brca1P48754 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Brca1P48754 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Gm6170-201ENSMUST00000187672 1388 ntBASIC13.44□□□□□ -0.26
Brca1P48754 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brca1P48754 Gm22846-201ENSMUST00000157706 270 ntBASIC13.43□□□□□ -0.26
Brca1P48754 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.43□□□□□ -0.26
Brca1P48754 Gm8451-201ENSMUST00000170338 447 ntBASIC13.43□□□□□ -0.26
Brca1P48754 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.43□□□□□ -0.26
Brca1P48754 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Brca1P48754 Gm7082-201ENSMUST00000209880 969 ntBASIC13.43□□□□□ -0.26
Brca1P48754 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC13.43□□□□□ -0.26
Brca1P48754 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brca1P48754 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brca1P48754 Gm7536-201ENSMUST00000077389 444 ntBASIC13.43□□□□□ -0.26
Brca1P48754 Gm5453-201ENSMUST00000080866 447 ntBASIC13.43□□□□□ -0.26
Brca1P48754 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Brca1P48754 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brca1P48754 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brca1P48754 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brca1P48754 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Brca1P48754 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brca1P48754 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brca1P48754 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Brca1P48754 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brca1P48754 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.43□□□□□ -0.26
Brca1P48754 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Brca1P48754 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Brca1P48754 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brca1P48754 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.43□□□□□ -0.26
Brca1P48754 Gm12791-201ENSMUST00000120788 655 ntBASIC13.43□□□□□ -0.26
Brca1P48754 Gm9089-201ENSMUST00000122027 526 ntBASIC13.43□□□□□ -0.26
Brca1P48754 Gm7719-201ENSMUST00000182374 975 ntBASIC13.43□□□□□ -0.26
Brca1P48754 Mir8093-201ENSMUST00000185043 137 ntBASIC13.43□□□□□ -0.26
Brca1P48754 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.43□□□□□ -0.26
Brca1P48754 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.43□□□□□ -0.26
Brca1P48754 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.43□□□□□ -0.26
Brca1P48754 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brca1P48754 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.43□□□□□ -0.26
Brca1P48754 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Brca1P48754 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.43□□□□□ -0.26
Brca1P48754 CT030652.1-201ENSMUST00000227377 1235 ntBASIC13.43□□□□□ -0.26
Brca1P48754 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.43□□□□□ -0.26
Brca1P48754 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.43□□□□□ -0.26
Brca1P48754 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Brca1P48754 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Brca1P48754 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms