Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.72□□□□□ -0.53
Prox1P48437 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.72□□□□□ -0.53
Prox1P48437 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.72□□□□□ -0.53
Prox1P48437 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Prox1P48437 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Prox1P48437 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Prox1P48437 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Gm13829-201ENSMUST00000119600 138 ntBASIC11.72□□□□□ -0.53
Prox1P48437 Gm2231-201ENSMUST00000125661 612 ntBASIC11.72□□□□□ -0.53
Prox1P48437 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.72□□□□□ -0.53
Prox1P48437 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.72□□□□□ -0.53
Prox1P48437 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Prox1P48437 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.72□□□□□ -0.53
Prox1P48437 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Prox1P48437 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.72□□□□□ -0.53
Prox1P48437 Gm8598-201ENSMUST00000221184 836 ntBASIC11.72□□□□□ -0.53
Prox1P48437 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.72□□□□□ -0.53
Prox1P48437 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.72□□□□□ -0.53
Prox1P48437 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.72□□□□□ -0.53
Prox1P48437 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.72□□□□□ -0.53
Prox1P48437 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Prox1P48437 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Prox1P48437 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Prox1P48437 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Prox1P48437 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Prox1P48437 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Prox1P48437 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.71□□□□□ -0.53
Prox1P48437 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Prox1P48437 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.71□□□□□ -0.53
Prox1P48437 Gm11637-201ENSMUST00000120601 592 ntBASIC11.71□□□□□ -0.53
Prox1P48437 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.71□□□□□ -0.53
Prox1P48437 Gm16479-201ENSMUST00000121706 932 ntBASIC11.71□□□□□ -0.53
Prox1P48437 Gm10156-201ENSMUST00000122364 462 ntBASIC11.71□□□□□ -0.53
Prox1P48437 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.71□□□□□ -0.53
Prox1P48437 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.71□□□□□ -0.53
Prox1P48437 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Prox1P48437 Gm22121-201ENSMUST00000175148 54 ntBASIC11.71□□□□□ -0.53
Prox1P48437 Proscos-202ENSMUST00000178990 666 ntBASIC11.71□□□□□ -0.53
Prox1P48437 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.71□□□□□ -0.53
Prox1P48437 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Gm7287-201ENSMUST00000205267 602 ntBASIC11.71□□□□□ -0.53
Prox1P48437 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.71□□□□□ -0.53
Prox1P48437 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.71□□□□□ -0.53
Prox1P48437 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Prox1P48437 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Prox1P48437 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Prox1P48437 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Prox1P48437 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Prox1P48437 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Prox1P48437 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Prox1P48437 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Prox1P48437 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Prox1P48437 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms