Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps4bP46467 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps4bP46467 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps4bP46467 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps4bP46467 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Vps4bP46467 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps4bP46467 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps4bP46467 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps4bP46467 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps4bP46467 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps4bP46467 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps4bP46467 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps4bP46467 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Vps4bP46467 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Vps4bP46467 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps4bP46467 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Gm24830-201ENSMUST00000102024 166 ntBASIC12.38□□□□□ -0.43
Vps4bP46467 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Vps4bP46467 Gm25261-201ENSMUST00000157416 134 ntBASIC12.38□□□□□ -0.43
Vps4bP46467 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Vps4bP46467 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.38□□□□□ -0.43
Vps4bP46467 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Vps4bP46467 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Gm26232-201ENSMUST00000083360 166 ntBASIC12.38□□□□□ -0.43
Vps4bP46467 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.38□□□□□ -0.43
Vps4bP46467 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Vps4bP46467 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.38□□□□□ -0.43
Vps4bP46467 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps4bP46467 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vps4bP46467 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps4bP46467 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.38□□□□□ -0.43
Vps4bP46467 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.37□□□□□ -0.43
Vps4bP46467 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vps4bP46467 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Vps4bP46467 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.37□□□□□ -0.43
Vps4bP46467 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Vps4bP46467 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.37□□□□□ -0.43
Vps4bP46467 Gm12058-201ENSMUST00000118614 437 ntBASIC12.37□□□□□ -0.43
Vps4bP46467 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.37□□□□□ -0.43
Vps4bP46467 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.37□□□□□ -0.43
Vps4bP46467 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.37□□□□□ -0.43
Vps4bP46467 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.37□□□□□ -0.43
Vps4bP46467 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vps4bP46467 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps4bP46467 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps4bP46467 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Vps4bP46467 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vps4bP46467 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps4bP46467 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.37□□□□□ -0.43
Vps4bP46467 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps4bP46467 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps4bP46467 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.36□□□□□ -0.43
Vps4bP46467 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Gm23912-201ENSMUST00000104687 87 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms