Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-6P43688 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Paupar-201ENSMUST00000194826 3482 ntBASIC11.55□□□□□ -0.56
Nkx2-6P43688 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Gm9550-201ENSMUST00000161130 862 ntBASIC11.55□□□□□ -0.56
Nkx2-6P43688 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.55□□□□□ -0.56
Nkx2-6P43688 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.55□□□□□ -0.56
Nkx2-6P43688 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.55□□□□□ -0.56
Nkx2-6P43688 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.55□□□□□ -0.56
Nkx2-6P43688 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.55□□□□□ -0.56
Nkx2-6P43688 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.55□□□□□ -0.56
Nkx2-6P43688 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Nkx2-6P43688 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.54□□□□□ -0.56
Nkx2-6P43688 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.54□□□□□ -0.56
Nkx2-6P43688 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.54□□□□□ -0.56
Nkx2-6P43688 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.54□□□□□ -0.56
Nkx2-6P43688 Gm13035-201ENSMUST00000117496 342 ntBASIC11.54□□□□□ -0.56
Nkx2-6P43688 Gm13045-201ENSMUST00000119019 712 ntBASIC11.54□□□□□ -0.56
Nkx2-6P43688 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Gm9211-201ENSMUST00000182882 975 ntBASIC11.54□□□□□ -0.56
Nkx2-6P43688 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Mir7677-201ENSMUST00000184226 67 ntBASIC11.54□□□□□ -0.56
Nkx2-6P43688 Gm37835-201ENSMUST00000193305 361 ntBASIC11.54□□□□□ -0.56
Nkx2-6P43688 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.54□□□□□ -0.56
Nkx2-6P43688 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.54□□□□□ -0.56
Nkx2-6P43688 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.54□□□□□ -0.56
Nkx2-6P43688 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.54□□□□□ -0.56
Nkx2-6P43688 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.54□□□□□ -0.56
Nkx2-6P43688 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx2-6P43688 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms