Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm12899-201ENSMUST00000120565 551 ntBASIC11.57□□□□□ -0.56
Cdx2P43241 Gm14247-201ENSMUST00000120950 237 ntBASIC11.57□□□□□ -0.56
Cdx2P43241 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdx2P43241 Gm8737-201ENSMUST00000122208 642 ntBASIC11.57□□□□□ -0.56
Cdx2P43241 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdx2P43241 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.57□□□□□ -0.56
Cdx2P43241 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.57□□□□□ -0.56
Cdx2P43241 Gm8815-201ENSMUST00000173809 620 ntBASIC11.57□□□□□ -0.56
Cdx2P43241 Gm23045-201ENSMUST00000175041 96 ntBASIC11.57□□□□□ -0.56
Cdx2P43241 Mir6998-201ENSMUST00000183343 64 ntBASIC11.57□□□□□ -0.56
Cdx2P43241 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.57□□□□□ -0.56
Cdx2P43241 Gm44980-201ENSMUST00000205826 314 ntBASIC11.57□□□□□ -0.56
Cdx2P43241 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdx2P43241 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdx2P43241 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdx2P43241 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdx2P43241 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdx2P43241 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdx2P43241 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdx2P43241 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cdx2P43241 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdx2P43241 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.57□□□□□ -0.56
Cdx2P43241 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdx2P43241 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdx2P43241 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdx2P43241 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Cdx2P43241 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdx2P43241 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdx2P43241 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdx2P43241 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdx2P43241 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdx2P43241 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cdx2P43241 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cdx2P43241 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cdx2P43241 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.56□□□□□ -0.56
Cdx2P43241 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdx2P43241 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdx2P43241 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cdx2P43241 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.56□□□□□ -0.56
Cdx2P43241 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cdx2P43241 Gm12579-201ENSMUST00000118040 783 ntBASIC11.56□□□□□ -0.56
Cdx2P43241 Gm5419-201ENSMUST00000119301 527 ntBASIC11.56□□□□□ -0.56
Cdx2P43241 Gm16071-201ENSMUST00000119589 793 ntBASIC11.56□□□□□ -0.56
Cdx2P43241 Gm13182-201ENSMUST00000122241 312 ntBASIC11.56□□□□□ -0.56
Cdx2P43241 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Cdx2P43241 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Gm17826-201ENSMUST00000189720 798 ntBASIC11.56□□□□□ -0.56
Cdx2P43241 Gm37028-201ENSMUST00000194276 107 ntBASIC11.56□□□□□ -0.56
Cdx2P43241 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.56□□□□□ -0.56
Cdx2P43241 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdx2P43241 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.56□□□□□ -0.56
Cdx2P43241 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cdx2P43241 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cdx2P43241 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Cdx2P43241 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdx2P43241 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Cdx2P43241 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdx2P43241 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.55□□□□□ -0.56
Cdx2P43241 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdx2P43241 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdx2P43241 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdx2P43241 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.55□□□□□ -0.56
Cdx2P43241 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdx2P43241 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdx2P43241 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdx2P43241 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdx2P43241 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdx2P43241 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdx2P43241 Gm22920-201ENSMUST00000102175 109 ntBASIC11.55□□□□□ -0.56
Cdx2P43241 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Cdx2P43241 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cdx2P43241 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Cdx2P43241 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdx2P43241 Gm8731-201ENSMUST00000118088 412 ntBASIC11.55□□□□□ -0.56
Cdx2P43241 Gm15004-201ENSMUST00000119192 630 ntBASIC11.55□□□□□ -0.56
Cdx2P43241 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.55□□□□□ -0.56
Cdx2P43241 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdx2P43241 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.55□□□□□ -0.56
Cdx2P43241 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
Cdx2P43241 Gm29499-201ENSMUST00000189151 486 ntBASIC11.55□□□□□ -0.56
Cdx2P43241 Gm28329-201ENSMUST00000191208 689 ntBASIC11.55□□□□□ -0.56
Cdx2P43241 Gm29171-201ENSMUST00000191397 486 ntBASIC11.55□□□□□ -0.56
Cdx2P43241 Gm44329-201ENSMUST00000197469 112 ntBASIC11.55□□□□□ -0.56
Cdx2P43241 Gm43520-201ENSMUST00000197996 164 ntBASIC11.55□□□□□ -0.56
Cdx2P43241 Gm18893-201ENSMUST00000198416 943 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms