Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.17□□□□□ -0.62
Nkx2-2P42586 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.17□□□□□ -0.62
Nkx2-2P42586 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-2P42586 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.16□□□□□ -0.62
Nkx2-2P42586 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.16□□□□□ -0.62
Nkx2-2P42586 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.16□□□□□ -0.62
Nkx2-2P42586 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Gm7722-201ENSMUST00000120646 741 ntBASIC11.16□□□□□ -0.62
Nkx2-2P42586 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Gm20482-202ENSMUST00000174729 825 ntBASIC11.16□□□□□ -0.62
Nkx2-2P42586 Gm37259-201ENSMUST00000193903 849 ntBASIC11.16□□□□□ -0.62
Nkx2-2P42586 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.16□□□□□ -0.62
Nkx2-2P42586 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.16□□□□□ -0.62
Nkx2-2P42586 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Gzmn-202ENSMUST00000225535 989 ntBASIC11.16□□□□□ -0.62
Nkx2-2P42586 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.16□□□□□ -0.62
Nkx2-2P42586 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-2P42586 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.15□□□□□ -0.62
Nkx2-2P42586 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Gm15610-201ENSMUST00000120584 195 ntBASIC11.15□□□□□ -0.62
Nkx2-2P42586 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.15□□□□□ -0.62
Nkx2-2P42586 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Gm45598-202ENSMUST00000210719 986 ntBASIC11.15□□□□□ -0.62
Nkx2-2P42586 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.15□□□□□ -0.62
Nkx2-2P42586 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
Nkx2-2P42586 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx2-2P42586 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms