Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC8.2□□□□□ -1.1
Rpl28P41105 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Rpl28P41105 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Rpl28P41105 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Rpl28P41105 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Rpl28P41105 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC8.2□□□□□ -1.1
Rpl28P41105 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC8.2□□□□□ -1.1
Rpl28P41105 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC8.2□□□□□ -1.1
Rpl28P41105 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC8.2□□□□□ -1.1
Rpl28P41105 Gm38055-201ENSMUST00000195353 2217 ntBASIC8.2□□□□□ -1.1
Rpl28P41105 Mup-ps23-201ENSMUST00000118063 630 ntBASIC8.2□□□□□ -1.1
Rpl28P41105 Gm8213-201ENSMUST00000118191 441 ntBASIC8.2□□□□□ -1.1
Rpl28P41105 Gm15806-201ENSMUST00000120696 955 ntBASIC8.2□□□□□ -1.1
Rpl28P41105 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC8.2□□□□□ -1.1
Rpl28P41105 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
Rpl28P41105 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Gm27486-201ENSMUST00000184923 80 ntBASIC8.2□□□□□ -1.1
Rpl28P41105 Gm18916-201ENSMUST00000198264 1246 ntBASIC8.2□□□□□ -1.1
Rpl28P41105 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC8.2□□□□□ -1.1
Rpl28P41105 Gm44064-201ENSMUST00000204964 1087 ntBASIC8.2□□□□□ -1.1
Rpl28P41105 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC8.2□□□□□ -1.1
Rpl28P41105 Gm8463-201ENSMUST00000208573 613 ntBASIC8.2□□□□□ -1.1
Rpl28P41105 Gm45384-201ENSMUST00000210451 277 ntBASIC8.2□□□□□ -1.1
Rpl28P41105 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC8.2□□□□□ -1.1
Rpl28P41105 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC8.2□□□□□ -1.1
Rpl28P41105 AC159006.1-201ENSMUST00000226396 258 ntBASIC8.2□□□□□ -1.1
Rpl28P41105 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC8.2□□□□□ -1.1
Rpl28P41105 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Rpl28P41105 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC8.2□□□□□ -1.1
Rpl28P41105 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC8.2□□□□□ -1.1
Rpl28P41105 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
Rpl28P41105 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
Rpl28P41105 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Rpl28P41105 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rpl28P41105 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
Rpl28P41105 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC8.19□□□□□ -1.1
Rpl28P41105 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Rpl28P41105 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC8.19□□□□□ -1.1
Rpl28P41105 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Rpl28P41105 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC8.19□□□□□ -1.1
Rpl28P41105 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Rpl28P41105 Gm11478-201ENSMUST00000117851 599 ntBASIC8.19□□□□□ -1.1
Rpl28P41105 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC8.19□□□□□ -1.1
Rpl28P41105 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC8.19□□□□□ -1.1
Rpl28P41105 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Gm27892-201ENSMUST00000185017 106 ntBASIC8.19□□□□□ -1.1
Rpl28P41105 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC8.19□□□□□ -1.1
Rpl28P41105 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC8.19□□□□□ -1.1
Rpl28P41105 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms