Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.05□□□□□ -0.8
Timp3P39876 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.05□□□□□ -0.8
Timp3P39876 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.05□□□□□ -0.8
Timp3P39876 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Timp3P39876 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.05□□□□□ -0.8
Timp3P39876 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.05□□□□□ -0.8
Timp3P39876 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Timp3P39876 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Timp3P39876 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Timp3P39876 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Timp3P39876 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.05□□□□□ -0.8
Timp3P39876 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.04□□□□□ -0.8
Timp3P39876 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Timp3P39876 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.04□□□□□ -0.8
Timp3P39876 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Timp3P39876 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.04□□□□□ -0.8
Timp3P39876 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.04□□□□□ -0.8
Timp3P39876 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Timp3P39876 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.04□□□□□ -0.8
Timp3P39876 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.04□□□□□ -0.8
Timp3P39876 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.04□□□□□ -0.8
Timp3P39876 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.04□□□□□ -0.8
Timp3P39876 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.04□□□□□ -0.8
Timp3P39876 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Timp3P39876 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.04□□□□□ -0.8
Timp3P39876 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.04□□□□□ -0.8
Timp3P39876 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.04□□□□□ -0.8
Timp3P39876 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.04□□□□□ -0.8
Timp3P39876 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Timp3P39876 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.04□□□□□ -0.8
Timp3P39876 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Timp3P39876 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Timp3P39876 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.03□□□□□ -0.8
Timp3P39876 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Timp3P39876 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.03□□□□□ -0.8
Timp3P39876 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.03□□□□□ -0.8
Timp3P39876 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Timp3P39876 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Timp3P39876 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms