Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.17□□□□□ -0.46
Nckap1P28660 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.17□□□□□ -0.46
Nckap1P28660 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Nckap1P28660 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nckap1P28660 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Nckap1P28660 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.17□□□□□ -0.46
Nckap1P28660 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.17□□□□□ -0.46
Nckap1P28660 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.17□□□□□ -0.46
Nckap1P28660 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.17□□□□□ -0.46
Nckap1P28660 Gm20426-201ENSMUST00000173657 440 ntBASIC12.17□□□□□ -0.46
Nckap1P28660 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.17□□□□□ -0.46
Nckap1P28660 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nckap1P28660 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.17□□□□□ -0.46
Nckap1P28660 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.17□□□□□ -0.46
Nckap1P28660 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nckap1P28660 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nckap1P28660 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nckap1P28660 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Nckap1P28660 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.16□□□□□ -0.46
Nckap1P28660 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.16□□□□□ -0.46
Nckap1P28660 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Gm23912-201ENSMUST00000104687 87 ntBASIC12.16□□□□□ -0.46
Nckap1P28660 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Nckap1P28660 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Gm11450-201ENSMUST00000121144 333 ntBASIC12.16□□□□□ -0.46
Nckap1P28660 Gm14760-201ENSMUST00000121831 999 ntBASIC12.16□□□□□ -0.46
Nckap1P28660 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nckap1P28660 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.16□□□□□ -0.46
Nckap1P28660 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.16□□□□□ -0.46
Nckap1P28660 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.16□□□□□ -0.46
Nckap1P28660 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.16□□□□□ -0.46
Nckap1P28660 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.16□□□□□ -0.46
Nckap1P28660 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.16□□□□□ -0.46
Nckap1P28660 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Nckap1P28660 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nckap1P28660 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nckap1P28660 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Nckap1P28660 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nckap1P28660 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.15□□□□□ -0.46
Nckap1P28660 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.15□□□□□ -0.46
Nckap1P28660 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Nckap1P28660 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.15□□□□□ -0.46
Nckap1P28660 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.15□□□□□ -0.46
Nckap1P28660 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nckap1P28660 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms