Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd40lgP27548 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.32□□□□□ -0.6
Cd40lgP27548 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd40lgP27548 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd40lgP27548 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.31□□□□□ -0.6
Cd40lgP27548 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.31□□□□□ -0.6
Cd40lgP27548 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cd40lgP27548 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.31□□□□□ -0.6
Cd40lgP27548 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Gm12058-201ENSMUST00000118614 437 ntBASIC11.31□□□□□ -0.6
Cd40lgP27548 Gm11964-201ENSMUST00000120982 444 ntBASIC11.31□□□□□ -0.6
Cd40lgP27548 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.31□□□□□ -0.6
Cd40lgP27548 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Gm38341-201ENSMUST00000195357 515 ntBASIC11.31□□□□□ -0.6
Cd40lgP27548 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.31□□□□□ -0.6
Cd40lgP27548 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.31□□□□□ -0.6
Cd40lgP27548 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cd40lgP27548 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cd40lgP27548 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cd40lgP27548 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.31□□□□□ -0.6
Cd40lgP27548 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cd40lgP27548 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cd40lgP27548 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd40lgP27548 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.3□□□□□ -0.6
Cd40lgP27548 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.3□□□□□ -0.6
Cd40lgP27548 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cd40lgP27548 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cd40lgP27548 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cd40lgP27548 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Cd40lgP27548 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Cd40lgP27548 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.3□□□□□ -0.6
Cd40lgP27548 Gm13316-201ENSMUST00000140537 691 ntBASIC11.3□□□□□ -0.6
Cd40lgP27548 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Cd40lgP27548 Gm8018-201ENSMUST00000173536 789 ntBASIC11.3□□□□□ -0.6
Cd40lgP27548 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.3□□□□□ -0.6
Cd40lgP27548 Gm6621-201ENSMUST00000193251 772 ntBASIC11.3□□□□□ -0.6
Cd40lgP27548 Gm31256-201ENSMUST00000194705 506 ntBASIC11.3□□□□□ -0.6
Cd40lgP27548 Cts7-204ENSMUST00000225321 1257 ntBASIC11.3□□□□□ -0.6
Cd40lgP27548 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.3□□□□□ -0.6
Cd40lgP27548 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.3□□□□□ -0.6
Cd40lgP27548 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Cd40lgP27548 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.3□□□□□ -0.6
Cd40lgP27548 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.3□□□□□ -0.6
Cd40lgP27548 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cd40lgP27548 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cd40lgP27548 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms