Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.11□□□□□ -0.63
Cbx3P23198 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cbx3P23198 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cbx3P23198 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.11□□□□□ -0.63
Cbx3P23198 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cbx3P23198 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Cbx3P23198 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cbx3P23198 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.1□□□□□ -0.63
Cbx3P23198 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.1□□□□□ -0.63
Cbx3P23198 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Gm23935-201ENSMUST00000102303 57 ntBASIC11.1□□□□□ -0.63
Cbx3P23198 Gm24270-201ENSMUST00000102326 57 ntBASIC11.1□□□□□ -0.63
Cbx3P23198 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Cbx3P23198 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.1□□□□□ -0.63
Cbx3P23198 Gm24245-201ENSMUST00000157318 57 ntBASIC11.1□□□□□ -0.63
Cbx3P23198 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.1□□□□□ -0.63
Cbx3P23198 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cbx3P23198 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.1□□□□□ -0.63
Cbx3P23198 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cbx3P23198 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cbx3P23198 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.09□□□□□ -0.63
Cbx3P23198 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cbx3P23198 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cbx3P23198 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Cbx3P23198 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cbx3P23198 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cbx3P23198 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cbx3P23198 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cbx3P23198 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.09□□□□□ -0.63
Cbx3P23198 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.09□□□□□ -0.63
Cbx3P23198 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Cbx3P23198 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.09□□□□□ -0.63
Cbx3P23198 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.09□□□□□ -0.63
Cbx3P23198 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.09□□□□□ -0.63
Cbx3P23198 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.09□□□□□ -0.63
Cbx3P23198 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.09□□□□□ -0.63
Cbx3P23198 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Cbx3P23198 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.09□□□□□ -0.63
Cbx3P23198 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.09□□□□□ -0.63
Cbx3P23198 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Cbx3P23198 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cbx3P23198 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cbx3P23198 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.09□□□□□ -0.63
Cbx3P23198 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.09□□□□□ -0.63
Cbx3P23198 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.09□□□□□ -0.63
Cbx3P23198 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cbx3P23198 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cbx3P23198 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cbx3P23198 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms