Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Gm9630-201ENSMUST00000178304 885 ntBASIC11.47□□□□□ -0.57
Clk1P22518 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.47□□□□□ -0.57
Clk1P22518 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Clk1P22518 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.47□□□□□ -0.57
Clk1P22518 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.47□□□□□ -0.57
Clk1P22518 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.47□□□□□ -0.57
Clk1P22518 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.47□□□□□ -0.57
Clk1P22518 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.47□□□□□ -0.57
Clk1P22518 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Gm26035-201ENSMUST00000083065 308 ntBASIC11.47□□□□□ -0.57
Clk1P22518 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Clk1P22518 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Clk1P22518 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Clk1P22518 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.47□□□□□ -0.57
Clk1P22518 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clk1P22518 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.46□□□□□ -0.57
Clk1P22518 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.46□□□□□ -0.57
Clk1P22518 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Clk1P22518 Gm3890-201ENSMUST00000182416 207 ntBASIC11.46□□□□□ -0.57
Clk1P22518 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.46□□□□□ -0.57
Clk1P22518 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Clk1P22518 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clk1P22518 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Clk1P22518 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Clk1P22518 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clk1P22518 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Clk1P22518 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clk1P22518 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clk1P22518 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clk1P22518 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clk1P22518 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clk1P22518 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clk1P22518 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Clk1P22518 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Clk1P22518 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.45□□□□□ -0.58
Clk1P22518 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.45□□□□□ -0.58
Clk1P22518 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Clk1P22518 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.45□□□□□ -0.58
Clk1P22518 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 BC043934-202ENSMUST00000185694 2356 ntBASIC11.45□□□□□ -0.58
Clk1P22518 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Clk1P22518 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Clk1P22518 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Gm12502-201ENSMUST00000120197 444 ntBASIC11.45□□□□□ -0.58
Clk1P22518 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Clk1P22518 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Gm7809-201ENSMUST00000153199 742 ntBASIC11.45□□□□□ -0.58
Clk1P22518 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Clk1P22518 Gm8018-201ENSMUST00000173536 789 ntBASIC11.45□□□□□ -0.58
Clk1P22518 Gm37424-201ENSMUST00000191727 561 ntBASIC11.45□□□□□ -0.58
Clk1P22518 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.45□□□□□ -0.58
Clk1P22518 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Clk1P22518 Gm45925-201ENSMUST00000218882 744 ntBASIC11.45□□□□□ -0.58
Clk1P22518 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.45□□□□□ -0.58
Clk1P22518 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.45□□□□□ -0.58
Clk1P22518 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Clk1P22518 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clk1P22518 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms