Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.34□□□□□ -0.43
VimP20152 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.34□□□□□ -0.43
VimP20152 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.34□□□□□ -0.43
VimP20152 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.34□□□□□ -0.43
VimP20152 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 Gm15703-201ENSMUST00000120250 880 ntBASIC12.34□□□□□ -0.43
VimP20152 Gm14704-201ENSMUST00000120300 874 ntBASIC12.34□□□□□ -0.43
VimP20152 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.34□□□□□ -0.43
VimP20152 Gm9522-201ENSMUST00000182394 926 ntBASIC12.34□□□□□ -0.43
VimP20152 Gm27618-201ENSMUST00000183671 60 ntBASIC12.34□□□□□ -0.43
VimP20152 Gm44882-201ENSMUST00000205702 802 ntBASIC12.34□□□□□ -0.43
VimP20152 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.34□□□□□ -0.43
VimP20152 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.34□□□□□ -0.43
VimP20152 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
VimP20152 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
VimP20152 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.34□□□□□ -0.43
VimP20152 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
VimP20152 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
VimP20152 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.33□□□□□ -0.43
VimP20152 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VimP20152 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.33□□□□□ -0.44
VimP20152 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VimP20152 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
VimP20152 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.33□□□□□ -0.44
VimP20152 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Gm5264-201ENSMUST00000190584 848 ntBASIC12.33□□□□□ -0.44
VimP20152 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.33□□□□□ -0.44
VimP20152 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.33□□□□□ -0.44
VimP20152 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.33□□□□□ -0.44
VimP20152 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
VimP20152 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.33□□□□□ -0.44
VimP20152 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VimP20152 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VimP20152 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VimP20152 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.32□□□□□ -0.44
VimP20152 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.32□□□□□ -0.44
VimP20152 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.32□□□□□ -0.44
VimP20152 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
VimP20152 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.32□□□□□ -0.44
VimP20152 Gm23363-201ENSMUST00000175024 79 ntBASIC12.32□□□□□ -0.44
VimP20152 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.32□□□□□ -0.44
VimP20152 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
VimP20152 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Gm27525-201ENSMUST00000184465 107 ntBASIC12.32□□□□□ -0.44
VimP20152 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
VimP20152 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
VimP20152 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.32□□□□□ -0.44
VimP20152 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.32□□□□□ -0.44
VimP20152 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.32□□□□□ -0.44
VimP20152 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms