Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Gm27390-201ENSMUST00000184516 176 ntBASIC11.05□□□□□ -0.64
TpbpaP13438 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.05□□□□□ -0.64
TpbpaP13438 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.05□□□□□ -0.64
TpbpaP13438 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.05□□□□□ -0.64
TpbpaP13438 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
TpbpaP13438 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
TpbpaP13438 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.05□□□□□ -0.64
TpbpaP13438 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
TpbpaP13438 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.05□□□□□ -0.64
TpbpaP13438 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TpbpaP13438 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
TpbpaP13438 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.04□□□□□ -0.64
TpbpaP13438 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
TpbpaP13438 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.04□□□□□ -0.64
TpbpaP13438 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TpbpaP13438 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.04□□□□□ -0.64
TpbpaP13438 Gm15703-201ENSMUST00000120250 880 ntBASIC11.04□□□□□ -0.64
TpbpaP13438 Gm14760-201ENSMUST00000121831 999 ntBASIC11.04□□□□□ -0.64
TpbpaP13438 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.04□□□□□ -0.64
TpbpaP13438 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.04□□□□□ -0.64
TpbpaP13438 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
TpbpaP13438 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
TpbpaP13438 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
TpbpaP13438 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Gm29705-201ENSMUST00000212598 474 ntBASIC11.04□□□□□ -0.64
TpbpaP13438 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.04□□□□□ -0.64
TpbpaP13438 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.04□□□□□ -0.64
TpbpaP13438 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TpbpaP13438 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TpbpaP13438 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TpbpaP13438 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpaP13438 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
TpbpaP13438 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpaP13438 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpaP13438 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
TpbpaP13438 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.03□□□□□ -0.64
TpbpaP13438 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpaP13438 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpaP13438 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpaP13438 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.03□□□□□ -0.64
TpbpaP13438 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpaP13438 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpaP13438 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpaP13438 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpaP13438 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpaP13438 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpaP13438 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TpbpaP13438 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms