Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Gm6407-201ENSMUST00000176468 549 ntBASIC13.5□□□□□ -0.25
Hoxc6P10629 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.5□□□□□ -0.25
Hoxc6P10629 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.5□□□□□ -0.25
Hoxc6P10629 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.5□□□□□ -0.25
Hoxc6P10629 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.5□□□□□ -0.25
Hoxc6P10629 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hoxc6P10629 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hoxc6P10629 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hoxc6P10629 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Hoxc6P10629 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.5□□□□□ -0.25
Hoxc6P10629 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Hoxc6P10629 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc6P10629 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.49□□□□□ -0.25
Hoxc6P10629 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.49□□□□□ -0.25
Hoxc6P10629 Gm13916-201ENSMUST00000117368 628 ntBASIC13.49□□□□□ -0.25
Hoxc6P10629 Gm1848-201ENSMUST00000120711 789 ntBASIC13.49□□□□□ -0.25
Hoxc6P10629 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.49□□□□□ -0.25
Hoxc6P10629 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Hoxc6P10629 Gm29499-201ENSMUST00000189151 486 ntBASIC13.49□□□□□ -0.25
Hoxc6P10629 Gm28329-201ENSMUST00000191208 689 ntBASIC13.49□□□□□ -0.25
Hoxc6P10629 Gm29171-201ENSMUST00000191397 486 ntBASIC13.49□□□□□ -0.25
Hoxc6P10629 Gm9645-201ENSMUST00000197131 792 ntBASIC13.49□□□□□ -0.25
Hoxc6P10629 Gm18893-201ENSMUST00000198416 943 ntBASIC13.49□□□□□ -0.25
Hoxc6P10629 Gm6867-201ENSMUST00000219165 425 ntBASIC13.49□□□□□ -0.25
Hoxc6P10629 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Hoxc6P10629 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.49□□□□□ -0.25
Hoxc6P10629 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc6P10629 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Hoxc6P10629 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Hoxc6P10629 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Hoxc6P10629 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.48□□□□□ -0.25
Hoxc6P10629 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.48□□□□□ -0.25
Hoxc6P10629 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.48□□□□□ -0.25
Hoxc6P10629 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.48□□□□□ -0.25
Hoxc6P10629 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.48□□□□□ -0.25
Hoxc6P10629 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.48□□□□□ -0.25
Hoxc6P10629 Gm10731-201ENSMUST00000181171 448 ntBASIC13.48□□□□□ -0.25
Hoxc6P10629 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
Hoxc6P10629 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Hoxc6P10629 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Hoxc6P10629 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc6P10629 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Hoxc6P10629 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.47□□□□□ -0.25
Hoxc6P10629 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Hoxc6P10629 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc6P10629 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc6P10629 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc6P10629 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Hoxc6P10629 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms