Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UbbP0CG49 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UbbP0CG49 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UbbP0CG49 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.61□□□□□ -0.71
UbbP0CG49 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.61□□□□□ -0.71
UbbP0CG49 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.61□□□□□ -0.71
UbbP0CG49 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.61□□□□□ -0.71
UbbP0CG49 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.61□□□□□ -0.71
UbbP0CG49 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
UbbP0CG49 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.61□□□□□ -0.71
UbbP0CG49 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.61□□□□□ -0.71
UbbP0CG49 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
UbbP0CG49 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.61□□□□□ -0.71
UbbP0CG49 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.61□□□□□ -0.71
UbbP0CG49 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Gm9022-201ENSMUST00000182482 992 ntBASIC10.61□□□□□ -0.71
UbbP0CG49 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.61□□□□□ -0.71
UbbP0CG49 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.61□□□□□ -0.71
UbbP0CG49 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Gm10012-201ENSMUST00000078252 192 ntBASIC10.61□□□□□ -0.71
UbbP0CG49 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.61□□□□□ -0.71
UbbP0CG49 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.61□□□□□ -0.71
UbbP0CG49 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
UbbP0CG49 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UbbP0CG49 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
UbbP0CG49 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.61□□□□□ -0.71
UbbP0CG49 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.6□□□□□ -0.71
UbbP0CG49 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.6□□□□□ -0.71
UbbP0CG49 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.6□□□□□ -0.71
UbbP0CG49 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
UbbP0CG49 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.6□□□□□ -0.71
UbbP0CG49 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.6□□□□□ -0.71
UbbP0CG49 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
UbbP0CG49 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
UbbP0CG49 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
UbbP0CG49 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Gm11814-201ENSMUST00000119515 929 ntBASIC10.6□□□□□ -0.71
UbbP0CG49 Gm11918-201ENSMUST00000121660 179 ntBASIC10.6□□□□□ -0.71
UbbP0CG49 Gm12363-201ENSMUST00000122250 668 ntBASIC10.6□□□□□ -0.71
UbbP0CG49 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.6□□□□□ -0.71
UbbP0CG49 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.6□□□□□ -0.71
UbbP0CG49 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Gm4271-201ENSMUST00000174444 973 ntBASIC10.6□□□□□ -0.71
UbbP0CG49 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.6□□□□□ -0.71
UbbP0CG49 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.6□□□□□ -0.71
UbbP0CG49 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.6□□□□□ -0.71
UbbP0CG49 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.6□□□□□ -0.71
UbbP0CG49 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.6□□□□□ -0.71
UbbP0CG49 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.6□□□□□ -0.71
UbbP0CG49 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Gm5356-201ENSMUST00000093326 615 ntBASIC10.6□□□□□ -0.71
UbbP0CG49 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.6□□□□□ -0.71
UbbP0CG49 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UbbP0CG49 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
UbbP0CG49 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms