Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.72■□□□□ 0.11
Hoxc9P09633 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.72■□□□□ 0.11
Hoxc9P09633 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc9P09633 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.72■□□□□ 0.11
Hoxc9P09633 CT009489.1-201ENSMUST00000227740 1893 ntBASIC15.72■□□□□ 0.11
Hoxc9P09633 Gm18198-201ENSMUST00000204986 1551 ntBASIC15.72■□□□□ 0.11
Hoxc9P09633 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC15.72■□□□□ 0.11
Hoxc9P09633 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Hoxc9P09633 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC15.72■□□□□ 0.11
Hoxc9P09633 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc9P09633 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Hoxc9P09633 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hoxc9P09633 Gm12856-201ENSMUST00000119471 1293 ntBASIC15.72■□□□□ 0.11
Hoxc9P09633 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Hoxc9P09633 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc9P09633 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC15.72■□□□□ 0.11
Hoxc9P09633 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Hoxc9P09633 Gm12407-201ENSMUST00000180219 324 ntBASIC15.72■□□□□ 0.11
Hoxc9P09633 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.72■□□□□ 0.11
Hoxc9P09633 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Hoxc9P09633 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc9P09633 AC115122.1-201ENSMUST00000224850 1040 ntBASIC15.72■□□□□ 0.11
Hoxc9P09633 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc9P09633 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc9P09633 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Hoxc9P09633 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc9P09633 Gm5780-201ENSMUST00000217774 1834 ntBASIC15.72■□□□□ 0.11
Hoxc9P09633 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc9P09633 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hoxc9P09633 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc9P09633 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc9P09633 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Hoxc9P09633 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC15.72■□□□□ 0.11
Hoxc9P09633 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc9P09633 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.71■□□□□ 0.11
Hoxc9P09633 Gm25076-201ENSMUST00000104098 132 ntBASIC15.71■□□□□ 0.11
Hoxc9P09633 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Gm16397-201ENSMUST00000122201 494 ntBASIC15.71■□□□□ 0.11
Hoxc9P09633 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Mir1956-201ENSMUST00000157748 65 ntBASIC15.71■□□□□ 0.11
Hoxc9P09633 Gm3150-201ENSMUST00000166418 204 ntBASIC15.71■□□□□ 0.11
Hoxc9P09633 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Mir6998-201ENSMUST00000183343 64 ntBASIC15.71■□□□□ 0.11
Hoxc9P09633 Gm44506-201ENSMUST00000206278 965 ntBASIC15.71■□□□□ 0.11
Hoxc9P09633 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC15.71■□□□□ 0.11
Hoxc9P09633 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Hoxc9P09633 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxc9P09633 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hoxc9P09633 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc9P09633 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc9P09633 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc9P09633 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.7■□□□□ 0.1
Hoxc9P09633 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.7■□□□□ 0.1
Hoxc9P09633 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc9P09633 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc9P09633 Gm38151-201ENSMUST00000195085 289 ntBASIC15.7■□□□□ 0.1
Hoxc9P09633 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC15.7■□□□□ 0.1
Hoxc9P09633 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC15.7■□□□□ 0.1
Hoxc9P09633 Gm45113-201ENSMUST00000207518 165 ntBASIC15.7■□□□□ 0.1
Hoxc9P09633 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc9P09633 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC15.7■□□□□ 0.1
Hoxc9P09633 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc9P09633 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc9P09633 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc9P09633 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc9P09633 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc9P09633 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Hoxc9P09633 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.7■□□□□ 0.1
Hoxc9P09633 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxc9P09633 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Hoxc9P09633 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Hoxc9P09633 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc9P09633 Gm13384-201ENSMUST00000117166 1344 ntBASIC15.69■□□□□ 0.1
Hoxc9P09633 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc9P09633 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc9P09633 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc9P09633 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc9P09633 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc9P09633 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC15.69■□□□□ 0.1
Hoxc9P09633 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc9P09633 Gm11675-201ENSMUST00000121873 832 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms