Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.91□□□□□ -0.34
Hoxc8P09025 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.91□□□□□ -0.34
Hoxc8P09025 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.91□□□□□ -0.34
Hoxc8P09025 Gm10807-201ENSMUST00000177134 795 ntBASIC12.91□□□□□ -0.34
Hoxc8P09025 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.91□□□□□ -0.34
Hoxc8P09025 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 Olfr584-201ENSMUST00000098210 964 ntBASIC12.91□□□□□ -0.34
Hoxc8P09025 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.91□□□□□ -0.34
Hoxc8P09025 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hoxc8P09025 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.91□□□□□ -0.34
Hoxc8P09025 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.91□□□□□ -0.34
Hoxc8P09025 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.91□□□□□ -0.34
Hoxc8P09025 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hoxc8P09025 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc8P09025 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.9□□□□□ -0.34
Hoxc8P09025 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
Hoxc8P09025 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Map1b-203ENSMUST00000223725 2669 ntBASIC12.9□□□□□ -0.34
Hoxc8P09025 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Hoxc8P09025 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.9□□□□□ -0.34
Hoxc8P09025 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.9□□□□□ -0.34
Hoxc8P09025 Gm28937-201ENSMUST00000185413 695 ntBASIC12.9□□□□□ -0.34
Hoxc8P09025 Gm29400-201ENSMUST00000187208 695 ntBASIC12.9□□□□□ -0.34
Hoxc8P09025 Gm28662-201ENSMUST00000188446 695 ntBASIC12.9□□□□□ -0.34
Hoxc8P09025 Gm28251-201ENSMUST00000188835 695 ntBASIC12.9□□□□□ -0.34
Hoxc8P09025 Gm37318-201ENSMUST00000194325 695 ntBASIC12.9□□□□□ -0.34
Hoxc8P09025 Gm38017-201ENSMUST00000194768 695 ntBASIC12.9□□□□□ -0.34
Hoxc8P09025 Gm37287-201ENSMUST00000195449 695 ntBASIC12.9□□□□□ -0.34
Hoxc8P09025 Gm37793-201ENSMUST00000195548 695 ntBASIC12.9□□□□□ -0.34
Hoxc8P09025 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Hoxc8P09025 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.9□□□□□ -0.34
Hoxc8P09025 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Hoxc8P09025 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.9□□□□□ -0.34
Hoxc8P09025 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Hoxc8P09025 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc8P09025 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.9□□□□□ -0.35
Hoxc8P09025 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.89□□□□□ -0.35
Hoxc8P09025 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Gm7150-201ENSMUST00000122032 981 ntBASIC12.89□□□□□ -0.35
Hoxc8P09025 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.89□□□□□ -0.35
Hoxc8P09025 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Mir6958-201ENSMUST00000184207 73 ntBASIC12.89□□□□□ -0.35
Hoxc8P09025 Gm42518-201ENSMUST00000196277 938 ntBASIC12.89□□□□□ -0.35
Hoxc8P09025 Gm42657-201ENSMUST00000201746 211 ntBASIC12.89□□□□□ -0.35
Hoxc8P09025 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.89□□□□□ -0.35
Hoxc8P09025 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Hoxc8P09025 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Hoxc8P09025 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc8P09025 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Hoxc8P09025 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Hoxc8P09025 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms