Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Polr2aP08775 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Polr2aP08775 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC13.67□□□□□ -0.22
Polr2aP08775 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Polr2aP08775 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Gm28833-201ENSMUST00000189671 559 ntBASIC13.67□□□□□ -0.22
Polr2aP08775 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 BC106175-202ENSMUST00000219344 1213 ntBASIC13.67□□□□□ -0.22
Polr2aP08775 AC158392.3-201ENSMUST00000224271 1284 ntBASIC13.67□□□□□ -0.22
Polr2aP08775 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Polr2aP08775 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Polr2aP08775 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.67□□□□□ -0.22
Polr2aP08775 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.67□□□□□ -0.22
Polr2aP08775 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC13.67□□□□□ -0.22
Polr2aP08775 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.67□□□□□ -0.22
Polr2aP08775 Gm9135-201ENSMUST00000182963 990 ntBASIC13.67□□□□□ -0.22
Polr2aP08775 Mir6941-201ENSMUST00000184711 59 ntBASIC13.67□□□□□ -0.22
Polr2aP08775 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.67□□□□□ -0.22
Polr2aP08775 Gm43671-201ENSMUST00000200422 433 ntBASIC13.67□□□□□ -0.22
Polr2aP08775 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.67□□□□□ -0.22
Polr2aP08775 CT030652.1-201ENSMUST00000227377 1235 ntBASIC13.67□□□□□ -0.22
Polr2aP08775 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.67□□□□□ -0.22
Polr2aP08775 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.67□□□□□ -0.22
Polr2aP08775 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.67□□□□□ -0.22
Polr2aP08775 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.67□□□□□ -0.22
Polr2aP08775 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Polr2aP08775 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Polr2aP08775 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.67□□□□□ -0.22
Polr2aP08775 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.67□□□□□ -0.22
Polr2aP08775 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Polr2aP08775 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Polr2aP08775 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.66□□□□□ -0.22
Polr2aP08775 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.66□□□□□ -0.22
Polr2aP08775 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Polr2aP08775 Gm12663-201ENSMUST00000118481 958 ntBASIC13.66□□□□□ -0.22
Polr2aP08775 Gm9673-201ENSMUST00000119287 781 ntBASIC13.66□□□□□ -0.22
Polr2aP08775 Gm12712-201ENSMUST00000120676 801 ntBASIC13.66□□□□□ -0.22
Polr2aP08775 Gng5-ps-201ENSMUST00000120931 205 ntBASIC13.66□□□□□ -0.22
Polr2aP08775 Mir1905-201ENSMUST00000122779 82 ntBASIC13.66□□□□□ -0.22
Polr2aP08775 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Gm5982-201ENSMUST00000196234 512 ntBASIC13.66□□□□□ -0.22
Polr2aP08775 Gm43854-201ENSMUST00000200418 394 ntBASIC13.66□□□□□ -0.22
Polr2aP08775 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Polr2aP08775 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Polr2aP08775 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Polr2aP08775 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Polr2aP08775 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.65□□□□□ -0.22
Polr2aP08775 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC13.65□□□□□ -0.22
Polr2aP08775 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC13.65□□□□□ -0.22
Polr2aP08775 Gm16030-201ENSMUST00000159098 603 ntBASIC13.65□□□□□ -0.22
Polr2aP08775 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.65□□□□□ -0.22
Polr2aP08775 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Polr2aP08775 Gm7082-201ENSMUST00000209880 969 ntBASIC13.65□□□□□ -0.22
Polr2aP08775 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.65□□□□□ -0.22
Polr2aP08775 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.65□□□□□ -0.22
Polr2aP08775 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms