Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm18893-201ENSMUST00000198416 943 ntBASIC12.92□□□□□ -0.34
TnfP06804 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.92□□□□□ -0.34
TnfP06804 Gm8956-201ENSMUST00000203939 825 ntBASIC12.92□□□□□ -0.34
TnfP06804 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.92□□□□□ -0.34
TnfP06804 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.92□□□□□ -0.34
TnfP06804 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
TnfP06804 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TnfP06804 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.92□□□□□ -0.34
TnfP06804 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.92□□□□□ -0.34
TnfP06804 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TnfP06804 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
TnfP06804 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TnfP06804 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Gm11509-201ENSMUST00000117358 325 ntBASIC12.91□□□□□ -0.34
TnfP06804 Gm5419-201ENSMUST00000119301 527 ntBASIC12.91□□□□□ -0.34
TnfP06804 Gm12196-201ENSMUST00000120954 262 ntBASIC12.91□□□□□ -0.34
TnfP06804 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TnfP06804 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.91□□□□□ -0.34
TnfP06804 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.91□□□□□ -0.34
TnfP06804 Gm42997-202ENSMUST00000200321 985 ntBASIC12.91□□□□□ -0.34
TnfP06804 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.91□□□□□ -0.34
TnfP06804 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TnfP06804 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.91□□□□□ -0.34
TnfP06804 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TnfP06804 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TnfP06804 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.91□□□□□ -0.34
TnfP06804 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Cog3-203ENSMUST00000227473 4197 ntBASIC12.9□□□□□ -0.34
TnfP06804 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.9□□□□□ -0.34
TnfP06804 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.9□□□□□ -0.34
TnfP06804 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
TnfP06804 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TnfP06804 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.9□□□□□ -0.34
TnfP06804 Gm14058-201ENSMUST00000116082 735 ntBASIC12.9□□□□□ -0.34
TnfP06804 Gm12501-201ENSMUST00000119163 529 ntBASIC12.9□□□□□ -0.34
TnfP06804 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.9□□□□□ -0.34
TnfP06804 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TnfP06804 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.9□□□□□ -0.34
TnfP06804 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.9□□□□□ -0.34
TnfP06804 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Gm5369-201ENSMUST00000217499 588 ntBASIC12.9□□□□□ -0.34
TnfP06804 Spcs1-203ENSMUST00000226374 592 ntBASIC12.9□□□□□ -0.34
TnfP06804 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.9□□□□□ -0.34
TnfP06804 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.9□□□□□ -0.34
TnfP06804 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TnfP06804 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TnfP06804 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
TnfP06804 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
TnfP06804 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TnfP06804 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TnfP06804 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TnfP06804 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TnfP06804 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms