Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
P03980 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Gm13492-201ENSMUST00000119772 665 ntBASIC9.4□□□□□ -0.9
P03980 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.4□□□□□ -0.9
P03980 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.4□□□□□ -0.9
P03980 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC9.4□□□□□ -0.9
P03980 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9.4□□□□□ -0.9
P03980 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P03980 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.4□□□□□ -0.91
P03980 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P03980 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P03980 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
P03980 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
P03980 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
P03980 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P03980 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P03980 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
P03980 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
P03980 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.39□□□□□ -0.91
P03980 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.39□□□□□ -0.91
P03980 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.39□□□□□ -0.91
P03980 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
P03980 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.39□□□□□ -0.91
P03980 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC9.39□□□□□ -0.91
P03980 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.39□□□□□ -0.91
P03980 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.39□□□□□ -0.91
P03980 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.39□□□□□ -0.91
P03980 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC9.39□□□□□ -0.91
P03980 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.39□□□□□ -0.91
P03980 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.39□□□□□ -0.91
P03980 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC9.39□□□□□ -0.91
P03980 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.39□□□□□ -0.91
P03980 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC9.39□□□□□ -0.91
P03980 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.39□□□□□ -0.91
P03980 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.39□□□□□ -0.91
P03980 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.39□□□□□ -0.91
P03980 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
P03980 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
P03980 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.39□□□□□ -0.91
P03980 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
P03980 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.39□□□□□ -0.91
P03980 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
P03980 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P03980 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P03980 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P03980 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
P03980 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
P03980 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P03980 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms