Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col4a1P02463 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Col4a1P02463 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col4a1P02463 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a1P02463 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Gm25766-201ENSMUST00000104101 131 ntBASIC14.68□□□□□ -0.06
Col4a1P02463 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Col4a1P02463 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC14.68□□□□□ -0.06
Col4a1P02463 Gm11960-201ENSMUST00000122068 925 ntBASIC14.68□□□□□ -0.06
Col4a1P02463 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC14.68□□□□□ -0.06
Col4a1P02463 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC14.68□□□□□ -0.06
Col4a1P02463 Mir8093-201ENSMUST00000185043 137 ntBASIC14.68□□□□□ -0.06
Col4a1P02463 Gm42518-201ENSMUST00000196277 938 ntBASIC14.68□□□□□ -0.06
Col4a1P02463 Gm39288-201ENSMUST00000210554 446 ntBASIC14.68□□□□□ -0.06
Col4a1P02463 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.68□□□□□ -0.06
Col4a1P02463 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Col4a1P02463 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.68□□□□□ -0.06
Col4a1P02463 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.68□□□□□ -0.06
Col4a1P02463 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.68□□□□□ -0.06
Col4a1P02463 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC14.68□□□□□ -0.06
Col4a1P02463 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC14.68□□□□□ -0.06
Col4a1P02463 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC14.68□□□□□ -0.06
Col4a1P02463 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC14.68□□□□□ -0.06
Col4a1P02463 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC14.68□□□□□ -0.06
Col4a1P02463 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col4a1P02463 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col4a1P02463 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.68□□□□□ -0.06
Col4a1P02463 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a1P02463 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col4a1P02463 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Col4a1P02463 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col4a1P02463 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col4a1P02463 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col4a1P02463 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.67□□□□□ -0.06
Col4a1P02463 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Col4a1P02463 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Col4a1P02463 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.67□□□□□ -0.06
Col4a1P02463 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.67□□□□□ -0.06
Col4a1P02463 AC154184.3-201ENSMUST00000225620 1090 ntBASIC14.67□□□□□ -0.06
Col4a1P02463 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col4a1P02463 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col4a1P02463 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Col4a1P02463 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a1P02463 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Col4a1P02463 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a1P02463 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms