Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.56□□□□□ -0.4
CopeO89079 Gm45925-201ENSMUST00000218882 744 ntBASIC12.56□□□□□ -0.4
CopeO89079 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopeO89079 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopeO89079 Gm22058-201ENSMUST00000083393 310 ntBASIC12.56□□□□□ -0.4
CopeO89079 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.56□□□□□ -0.4
CopeO89079 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.56□□□□□ -0.4
CopeO89079 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.56□□□□□ -0.4
CopeO89079 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopeO89079 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopeO89079 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopeO89079 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopeO89079 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopeO89079 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.56□□□□□ -0.4
CopeO89079 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopeO89079 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopeO89079 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CopeO89079 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopeO89079 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CopeO89079 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CopeO89079 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.55□□□□□ -0.4
CopeO89079 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CopeO89079 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.55□□□□□ -0.4
CopeO89079 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CopeO89079 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.55□□□□□ -0.4
CopeO89079 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CopeO89079 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.55□□□□□ -0.4
CopeO89079 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.55□□□□□ -0.4
CopeO89079 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CopeO89079 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CopeO89079 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CopeO89079 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.55□□□□□ -0.4
CopeO89079 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.55□□□□□ -0.4
CopeO89079 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.55□□□□□ -0.4
CopeO89079 Gm9002-201ENSMUST00000178437 499 ntBASIC12.55□□□□□ -0.4
CopeO89079 Gm26927-201ENSMUST00000182385 965 ntBASIC12.55□□□□□ -0.4
CopeO89079 Gm27847-201ENSMUST00000183711 107 ntBASIC12.55□□□□□ -0.4
CopeO89079 Gm27375-201ENSMUST00000183799 107 ntBASIC12.55□□□□□ -0.4
CopeO89079 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.55□□□□□ -0.4
CopeO89079 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.55□□□□□ -0.4
CopeO89079 Gm44405-201ENSMUST00000198952 126 ntBASIC12.55□□□□□ -0.4
CopeO89079 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.55□□□□□ -0.4
CopeO89079 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.55□□□□□ -0.4
CopeO89079 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CopeO89079 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CopeO89079 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
CopeO89079 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CopeO89079 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CopeO89079 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.55□□□□□ -0.4
CopeO89079 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
CopeO89079 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CopeO89079 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CopeO89079 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CopeO89079 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.54□□□□□ -0.4
CopeO89079 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CopeO89079 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CopeO89079 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
CopeO89079 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CopeO89079 Gm24830-201ENSMUST00000102024 166 ntBASIC12.54□□□□□ -0.4
CopeO89079 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CopeO89079 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.54□□□□□ -0.4
CopeO89079 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CopeO89079 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.54□□□□□ -0.4
CopeO89079 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CopeO89079 Gm12502-201ENSMUST00000120197 444 ntBASIC12.54□□□□□ -0.4
CopeO89079 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.54□□□□□ -0.4
CopeO89079 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.54□□□□□ -0.4
CopeO89079 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.54□□□□□ -0.4
CopeO89079 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.54□□□□□ -0.4
CopeO89079 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms