Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm16296-201ENSMUST00000159905 325 ntBASIC11.71□□□□□ -0.53
Hcn1O88704 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
Hcn1O88704 Gm37489-201ENSMUST00000191883 159 ntBASIC11.71□□□□□ -0.53
Hcn1O88704 Gm38266-201ENSMUST00000194931 421 ntBASIC11.71□□□□□ -0.53
Hcn1O88704 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.71□□□□□ -0.53
Hcn1O88704 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.71□□□□□ -0.53
Hcn1O88704 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.71□□□□□ -0.53
Hcn1O88704 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.71□□□□□ -0.53
Hcn1O88704 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.71□□□□□ -0.53
Hcn1O88704 Gm9368-201ENSMUST00000219348 831 ntBASIC11.71□□□□□ -0.53
Hcn1O88704 Gm8227-201ENSMUST00000223306 571 ntBASIC11.71□□□□□ -0.53
Hcn1O88704 Gm22058-201ENSMUST00000083393 310 ntBASIC11.71□□□□□ -0.53
Hcn1O88704 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.71□□□□□ -0.53
Hcn1O88704 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hcn1O88704 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.71□□□□□ -0.54
Hcn1O88704 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hcn1O88704 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hcn1O88704 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hcn1O88704 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hcn1O88704 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hcn1O88704 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hcn1O88704 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hcn1O88704 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hcn1O88704 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.7□□□□□ -0.54
Hcn1O88704 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.7□□□□□ -0.54
Hcn1O88704 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.7□□□□□ -0.54
Hcn1O88704 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Hcn1O88704 Gm10434-201ENSMUST00000101158 471 ntBASIC11.7□□□□□ -0.54
Hcn1O88704 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Hcn1O88704 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Gm15370-201ENSMUST00000117158 253 ntBASIC11.7□□□□□ -0.54
Hcn1O88704 Gm12241-201ENSMUST00000118330 726 ntBASIC11.7□□□□□ -0.54
Hcn1O88704 Gm14723-201ENSMUST00000118686 215 ntBASIC11.7□□□□□ -0.54
Hcn1O88704 Gm13297-201ENSMUST00000120205 934 ntBASIC11.7□□□□□ -0.54
Hcn1O88704 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Hcn1O88704 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.7□□□□□ -0.54
Hcn1O88704 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.7□□□□□ -0.54
Hcn1O88704 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.7□□□□□ -0.54
Hcn1O88704 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.7□□□□□ -0.54
Hcn1O88704 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Hcn1O88704 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcn1O88704 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Hcn1O88704 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.69□□□□□ -0.54
Hcn1O88704 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Hcn1O88704 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.69□□□□□ -0.54
Hcn1O88704 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.69□□□□□ -0.54
Hcn1O88704 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.69□□□□□ -0.54
Hcn1O88704 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.69□□□□□ -0.54
Hcn1O88704 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.69□□□□□ -0.54
Hcn1O88704 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.69□□□□□ -0.54
Hcn1O88704 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.69□□□□□ -0.54
Hcn1O88704 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Hcn1O88704 Gm6334-201ENSMUST00000207083 228 ntBASIC11.69□□□□□ -0.54
Hcn1O88704 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.69□□□□□ -0.54
Hcn1O88704 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.69□□□□□ -0.54
Hcn1O88704 Cts7-204ENSMUST00000225321 1257 ntBASIC11.69□□□□□ -0.54
Hcn1O88704 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcn1O88704 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Hcn1O88704 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms