Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pdlim1O70400 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Pdlim1O70400 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pdlim1O70400 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Pdlim1O70400 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Pdlim1O70400 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pdlim1O70400 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.08□□□□□ -0.48
Pdlim1O70400 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.08□□□□□ -0.48
Pdlim1O70400 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Pdlim1O70400 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Gm13296-201ENSMUST00000117854 997 ntBASIC12.08□□□□□ -0.48
Pdlim1O70400 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.08□□□□□ -0.48
Pdlim1O70400 Gm26083-201ENSMUST00000157904 193 ntBASIC12.08□□□□□ -0.48
Pdlim1O70400 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Pdlim1O70400 Mir6420-201ENSMUST00000185032 102 ntBASIC12.08□□□□□ -0.48
Pdlim1O70400 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.08□□□□□ -0.48
Pdlim1O70400 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pdlim1O70400 Gm44967-201ENSMUST00000207047 631 ntBASIC12.08□□□□□ -0.48
Pdlim1O70400 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Pdlim1O70400 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.08□□□□□ -0.48
Pdlim1O70400 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pdlim1O70400 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.08□□□□□ -0.48
Pdlim1O70400 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pdlim1O70400 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pdlim1O70400 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pdlim1O70400 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pdlim1O70400 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pdlim1O70400 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.07□□□□□ -0.48
Pdlim1O70400 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.07□□□□□ -0.48
Pdlim1O70400 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.07□□□□□ -0.48
Pdlim1O70400 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.07□□□□□ -0.48
Pdlim1O70400 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.07□□□□□ -0.48
Pdlim1O70400 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.07□□□□□ -0.48
Pdlim1O70400 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.07□□□□□ -0.48
Pdlim1O70400 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.07□□□□□ -0.48
Pdlim1O70400 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pdlim1O70400 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pdlim1O70400 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms