Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Smarce1O54941 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Smarce1O54941 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Smarce1O54941 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Smarce1O54941 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarce1O54941 Gm24934-201ENSMUST00000103764 111 ntBASIC14.47□□□□□ -0.09
Smarce1O54941 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Smarce1O54941 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.47□□□□□ -0.09
Smarce1O54941 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.47□□□□□ -0.09
Smarce1O54941 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Gm37201-201ENSMUST00000191845 523 ntBASIC14.47□□□□□ -0.09
Smarce1O54941 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarce1O54941 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.47□□□□□ -0.09
Smarce1O54941 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.47□□□□□ -0.09
Smarce1O54941 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Smarce1O54941 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarce1O54941 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Smarce1O54941 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarce1O54941 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Smarce1O54941 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Smarce1O54941 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Smarce1O54941 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Smarce1O54941 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Smarce1O54941 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarce1O54941 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarce1O54941 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarce1O54941 Gm6211-201ENSMUST00000147973 4275 ntBASIC14.46□□□□□ -0.09
Smarce1O54941 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Smarce1O54941 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Gm14999-201ENSMUST00000121039 624 ntBASIC14.46□□□□□ -0.09
Smarce1O54941 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.46□□□□□ -0.09
Smarce1O54941 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.46□□□□□ -0.09
Smarce1O54941 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Smarce1O54941 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Smarce1O54941 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Gm6222-202ENSMUST00000182143 629 ntBASIC14.46□□□□□ -0.09
Smarce1O54941 Gm7653-201ENSMUST00000214567 508 ntBASIC14.46□□□□□ -0.09
Smarce1O54941 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Smarce1O54941 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarce1O54941 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Smarce1O54941 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
Smarce1O54941 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Smarce1O54941 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Smarce1O54941 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarce1O54941 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.46□□□□□ -0.1
Smarce1O54941 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarce1O54941 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.46□□□□□ -0.1
Smarce1O54941 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.45□□□□□ -0.1
Smarce1O54941 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Smarce1O54941 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.45□□□□□ -0.1
Smarce1O54941 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.45□□□□□ -0.1
Smarce1O54941 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Gm12390-201ENSMUST00000117897 397 ntBASIC14.45□□□□□ -0.1
Smarce1O54941 Gm12058-201ENSMUST00000118614 437 ntBASIC14.45□□□□□ -0.1
Smarce1O54941 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.45□□□□□ -0.1
Smarce1O54941 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms