Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sdc4O35988 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.56□□□□□ -0.4
Sdc4O35988 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sdc4O35988 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.56□□□□□ -0.4
Sdc4O35988 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sdc4O35988 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.56□□□□□ -0.4
Sdc4O35988 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Sdc4O35988 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.56□□□□□ -0.4
Sdc4O35988 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.56□□□□□ -0.4
Sdc4O35988 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.56□□□□□ -0.4
Sdc4O35988 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sdc4O35988 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.56□□□□□ -0.4
Sdc4O35988 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.56□□□□□ -0.4
Sdc4O35988 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc4O35988 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sdc4O35988 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sdc4O35988 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.55□□□□□ -0.4
Sdc4O35988 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sdc4O35988 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sdc4O35988 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.55□□□□□ -0.4
Sdc4O35988 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.55□□□□□ -0.4
Sdc4O35988 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.55□□□□□ -0.4
Sdc4O35988 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.55□□□□□ -0.4
Sdc4O35988 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sdc4O35988 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Gm18734-201ENSMUST00000172937 808 ntBASIC12.55□□□□□ -0.4
Sdc4O35988 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sdc4O35988 AU022133-201ENSMUST00000200601 873 ntBASIC12.55□□□□□ -0.4
Sdc4O35988 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.55□□□□□ -0.4
Sdc4O35988 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sdc4O35988 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.55□□□□□ -0.4
Sdc4O35988 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.55□□□□□ -0.4
Sdc4O35988 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.55□□□□□ -0.4
Sdc4O35988 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.55□□□□□ -0.4
Sdc4O35988 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Sdc4O35988 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.55□□□□□ -0.4
Sdc4O35988 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sdc4O35988 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.54□□□□□ -0.4
Sdc4O35988 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.54□□□□□ -0.4
Sdc4O35988 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Sdc4O35988 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sdc4O35988 Gm7722-201ENSMUST00000120646 741 ntBASIC12.54□□□□□ -0.4
Sdc4O35988 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.54□□□□□ -0.4
Sdc4O35988 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms