Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.92□□□□□ -0.5
Npc1O35604 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.92□□□□□ -0.5
Npc1O35604 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.92□□□□□ -0.5
Npc1O35604 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.92□□□□□ -0.5
Npc1O35604 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Npc1O35604 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Npc1O35604 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.92□□□□□ -0.5
Npc1O35604 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Npc1O35604 Gm14017-201ENSMUST00000121934 386 ntBASIC11.92□□□□□ -0.5
Npc1O35604 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.92□□□□□ -0.5
Npc1O35604 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Gm9230-201ENSMUST00000188228 532 ntBASIC11.92□□□□□ -0.5
Npc1O35604 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.92□□□□□ -0.5
Npc1O35604 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.92□□□□□ -0.5
Npc1O35604 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.92□□□□□ -0.5
Npc1O35604 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Npc1O35604 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.92□□□□□ -0.5
Npc1O35604 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.92□□□□□ -0.5
Npc1O35604 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Npc1O35604 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Npc1O35604 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.92□□□□□ -0.5
Npc1O35604 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Npc1O35604 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Npc1O35604 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.91□□□□□ -0.5
Npc1O35604 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.91□□□□□ -0.5
Npc1O35604 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Npc1O35604 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Npc1O35604 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Npc1O35604 Gm24934-201ENSMUST00000103764 111 ntBASIC11.91□□□□□ -0.5
Npc1O35604 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Gm14644-201ENSMUST00000116671 647 ntBASIC11.91□□□□□ -0.5
Npc1O35604 Gm13296-201ENSMUST00000117854 997 ntBASIC11.91□□□□□ -0.5
Npc1O35604 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Npc1O35604 Gm32999-201ENSMUST00000192693 562 ntBASIC11.91□□□□□ -0.5
Npc1O35604 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Npc1O35604 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.91□□□□□ -0.5
Npc1O35604 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.91□□□□□ -0.5
Npc1O35604 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.91□□□□□ -0.5
Npc1O35604 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.91□□□□□ -0.5
Npc1O35604 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Npc1O35604 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.91□□□□□ -0.5
Npc1O35604 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npc1O35604 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.9□□□□□ -0.5
Npc1O35604 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.9□□□□□ -0.5
Npc1O35604 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Npc1O35604 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Npc1O35604 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms