Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.19□□□□□ -0.3
Ube3aO08759 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.19□□□□□ -0.3
Ube3aO08759 Gm23119-201ENSMUST00000158610 140 ntBASIC13.19□□□□□ -0.3
Ube3aO08759 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.19□□□□□ -0.3
Ube3aO08759 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ube3aO08759 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ube3aO08759 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.19□□□□□ -0.3
Ube3aO08759 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.19□□□□□ -0.3
Ube3aO08759 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Ube3aO08759 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.19□□□□□ -0.3
Ube3aO08759 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.19□□□□□ -0.3
Ube3aO08759 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube3aO08759 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube3aO08759 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.19□□□□□ -0.3
Ube3aO08759 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube3aO08759 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.19□□□□□ -0.3
Ube3aO08759 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube3aO08759 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube3aO08759 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.19□□□□□ -0.3
Ube3aO08759 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube3aO08759 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ube3aO08759 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ube3aO08759 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube3aO08759 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ube3aO08759 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.18□□□□□ -0.3
Ube3aO08759 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ube3aO08759 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.18□□□□□ -0.3
Ube3aO08759 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Gm12390-201ENSMUST00000117897 397 ntBASIC13.18□□□□□ -0.3
Ube3aO08759 Gm11814-201ENSMUST00000119515 929 ntBASIC13.18□□□□□ -0.3
Ube3aO08759 Gm11425-201ENSMUST00000119608 498 ntBASIC13.18□□□□□ -0.3
Ube3aO08759 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.18□□□□□ -0.3
Ube3aO08759 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.18□□□□□ -0.3
Ube3aO08759 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ube3aO08759 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.18□□□□□ -0.3
Ube3aO08759 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Gm9396-201ENSMUST00000076703 567 ntBASIC13.18□□□□□ -0.3
Ube3aO08759 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ube3aO08759 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.18□□□□□ -0.3
Ube3aO08759 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ube3aO08759 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.18□□□□□ -0.3
Ube3aO08759 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ube3aO08759 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ube3aO08759 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Ube3aO08759 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube3aO08759 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ube3aO08759 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ube3aO08759 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.17□□□□□ -0.3
Ube3aO08759 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.17□□□□□ -0.3
Ube3aO08759 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Ube3aO08759 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Gm11597-201ENSMUST00000121423 964 ntBASIC13.17□□□□□ -0.3
Ube3aO08759 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
Ube3aO08759 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.17□□□□□ -0.3
Ube3aO08759 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ube3aO08759 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.17□□□□□ -0.3
Ube3aO08759 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Ube3aO08759 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.17□□□□□ -0.3
Ube3aO08759 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.17□□□□□ -0.3
Ube3aO08759 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.17□□□□□ -0.3
Ube3aO08759 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube3aO08759 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube3aO08759 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube3aO08759 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ube3aO08759 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube3aO08759 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube3aO08759 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube3aO08759 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms